Escherichia coli O157:H7 7386WT |
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Putative Escherichia coli O157:H7 7386WT RM systems
Ref: Kalalah,A. and Eppinger,M. unpublished
REBASE ref # 33364
| Sequence length: | GenBank #: | |
| Chromosome: | 5,470,657 bp | CP089036 |
| plasmid pO157: | 92,418 bp | CP089037 |
REBASE acronym: Eco7386WT
Org_num: 53847
All begin CO544_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24150 | DUF262 domain-containing HNH endonuclease family | |||
| 24155 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco7386WTORF24160P |
| 24160 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco7386WTORF24160P |
| 24165 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco7386WTORF24160P |
| 24170 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2815 | DUF2556 family protein | |||
| 2820 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco7386WTORF2820P |
| 2825 | DNA-binding transcriptional regulator Fis | |||
| 7490 | DUF1382 family protein | |||
| 7495 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco7386WTORF7495P |
| 7500 | 55 aa hypothetical protein | |||
| 7675 | HNH endonuclease | |||
| 7680 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco7386WTORF7680P |
| 7685 | NinE family protein | |||
| 10405 | recombination protein NinB | |||
| 10410 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco7386WTORF10410P |
| 10415 | NinE family protein | |||
| 11230 | phosphohydrolase | |||
| 11235 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco7386WTDcmP |
| 11240 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco7386WTDcmP |
| 11245 | drug/metabolite exporter YedA | |||
| 15550 | DUF1737 domain-containing protein | |||
| 15565 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco7386WTORF15565P | |
| 15570 | TrmB family transcriptional regulator | |||
| 24385 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco7386WTORF24385P |
| 24390 | DEAD/DEAH box helicase | |||
| 24420 | N-acetylneuraminic acid mutarotase | |||
| 24425 | R | EcosPA8ORF17350P (100% identity) | Eco7386WTORF24425P | |
| 24430 | transposase | |||
| 25655 | Eae protein | |||
| 25660 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco7386WTORF25660P | |
| 25665 | 65 aa hypothetical protein | |||
| plasmid pO157 | ||||
| 27610 | 101 aa hypothetical protein | |||
| 27615 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco7386WTORF27615P | |
| 27620 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24170 | endoribonuclease SymE | |||
| 24175 | R | EcosPA8GmrSDP (55% identity) | Eco7386WTGmrDP | |
| 24180 | R | Ecos1613GmrSP (100% identity) | Eco7386WTGmrSP | |
| 24185 | cytoplasmic protein | |||