Escherichia coli 7386Nal |
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Putative Escherichia coli 7386Nal RM systems
Ref: Kalalah,A. and Eppinger,M. unpublished
REBASE ref # 33364
Complete sequence: 5,394,199 bp
GenBank #: CP089031
REBASE acronym: Eco7386Na1
Org_num: 53571
All begin CO543_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23710 | DUF262 domain-containing HNH endonuclease family | |||
| 23715 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco7386Na1ORF23720P |
| 23720 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco7386Na1ORF23720P |
| 23725 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco7386Na1ORF23720P |
| 23730 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2815 | DUF2556 family protein | |||
| 2820 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco7386Na1ORF2820P |
| 2825 | DNA-binding transcriptional regulator Fis | |||
| 7490 | DUF1382 family protein | |||
| 7495 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco7386Na1ORF7495P |
| 7500 | 55 aa hypothetical protein | |||
| 7675 | HNH endonuclease | |||
| 7680 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco7386Na1ORF7680P |
| 7685 | NinE family protein | |||
| 10405 | recombination protein NinB | |||
| 10410 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco7386Na1ORF10410P |
| 10415 | NinE family protein | |||
| 11660 | TrmB family transcriptional regulator | |||
| 11665 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco7386Na1ORF11665P | |
| 11680 | DUF1737 domain-containing protein | |||
| 17675 | drug/metabolite exporter YedA | |||
| 17680 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco7386Na1DcmP |
| 17685 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco7386Na1DcmP |
| 17690 | phosphohydrolase | |||
| 23945 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco7386Na1ORF23945P |
| 23950 | DEAD/DEAH box helicase | |||
| 23980 | N-acetylneuraminic acid mutarotase | |||
| 23985 | R | EcosPA8ORF17350P (100% identity) | Eco7386Na1ORF23985P | |
| 23990 | transposase | |||
| 25215 | Eae protein | |||
| 25220 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco7386Na1ORF25220P | |
| 25225 | 65 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23730 | endoribonuclease SymE | |||
| 23735 | R | EcosPA8GmrSDP (55% identity) | Eco7386Na1GmrDP | |
| 23740 | R | Ecos1613GmrSP (100% identity) | Eco7386Na1GmrSP | |
| 23745 | cytoplasmic protein | |||