Escherichia coli A17EC0016 |
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Putative Escherichia coli A17EC0016 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,969,241 bp | CP088833 |
| plasmid pA17EC0016-1: | 146,744 bp | CP088834 |
REBASE acronym: EcoC0016
Org_num: 53591
All begin LQT34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5985 | ash family protein | |||
| 5990 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0016ORF5995P |
| 5995 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0016ORF5995P |
| 6000 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0016ORF5995P |
| 6005 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3760 | 97 aa hypothetical protein | |||
| 3765 | R | Ecos19ORF20635P (100% identity) | EcoC0016ORF3765P | |
| 3770 | response regulator receiver domain | |||
| 3775 | ATP-binding protein | |||
| 3780 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC0016ORF3780P |
| 3785 | 174 aa hypothetical protein | |||
| 4050 | helix-turn-helix domain-containing protein | |||
| 4055 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0016ORF4055P |
| 4060 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0016ORF4055P |
| 4065 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0016ORF4055P |
| 4070 | McrC family protein | |||
| 10210 | TrmB family transcriptional regulator | |||
| 10215 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoC0016ORF10215P |
| 10230 | DUF3927 family protein | |||
| 21675 | DNA-binding transcriptional regulator Fis | |||
| 21680 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0016ORF21680P |
| 21685 | DUF2556 family protein | |||
| 22295 | ribulose-phosphate 3-epimerase | |||
| 22300 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0016DamP |
| 22305 | cell division protein DamX | |||
| plasmid pA17EC0016-1 | ||||
| 24120 | 73 aa hypothetical protein | |||
| 24125 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC0016ORF24125P |
| 24130 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14405 | SpnT protein | |||
| 14410 | M | M.EcosS2ORF3675P (100% identity) | M.EcoC0016ORF14410P | |
| 14415 | R | Ecost88ORF24685P (100% identity) | EcoC0016ORF14410P | |
| 14420 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4065 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 4070 | R | EcosS9McrCP (100% identity) | EcoC0016McrCP | |
| 4075 | R | EcosS3McrBP (100% identity) | EcoC0016McrBP | |
| 4080 | glycosyltransferase | |||