Escherichia coli B16EC0876 |
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Putative Escherichia coli B16EC0876 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,214,201 bp | CP088760 |
| plasmid pB16EC0876-1: | 93,183 bp | CP088761 |
REBASE acronym: EcoC0876
Org_num: 53618
All begin LQT93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3810 | endoribonuclease SymE | |||
| 3815 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0876ORF3825P |
| 3820 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0876ORF3825P |
| 3825 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0876ORF3825P |
| 3830 | restriction endonuclease | |||
| 5895 | ash family protein | |||
| 5900 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0876ORF5905P |
| 5905 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0876ORF5905P |
| 5910 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0876ORF5905P |
| 5915 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pB16EC0876-1 | ||||
| 25870 | IS1-like element IS1A family transposase | |||
| 25875 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0876ORF25875P | |
| 25880 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2515 | conjugal transfer protein TraG N-terminal | |||
| 2520 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0876ORF2520P | |
| 2525 | R | EcosS3ORF15775P (100% identity) | EcoC0876ORF2520P | |
| 2530 | response regulator receiver domain | |||
| 5680 | PerC family transcriptional regulator | |||
| 5685 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0876ORF5685P |
| 5690 | LexA family transcriptional regulator | |||
| 5725 | 95 aa hypothetical protein | |||
| 5730 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0876ORF5730P | |
| 5735 | phage lysis protein EssD | |||
| 9415 | 71 aa hypothetical protein | |||
| 9420 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0876ORF9420P | |
| 9425 | helix-turn-helix domain-containing protein | |||
| 11695 | TrmB family transcriptional regulator | |||
| 11700 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0876ORF11700P |
| 11715 | DUF3927 family protein | |||
| 18730 | PerC family transcriptional regulator | |||
| 18735 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0876ORF18735P |
| 18740 | DUF1382 family protein | |||
| 23100 | DNA-binding transcriptional regulator Fis | |||
| 23105 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0876ORF23105P |
| 23110 | DUF2556 family protein | |||
| 23700 | ribulose-phosphate 3-epimerase | |||
| 23705 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0876DamP |
| 23710 | cell division protein DamX | |||
| plasmid pB16EC0876-1 | ||||
| 25645 | 103 aa hypothetical protein | |||
| 25650 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0876ORF25650P |
| 25655 | 73 aa hypothetical protein | |||