Escherichia coli B17EC0578 |
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Putative Escherichia coli B17EC0578 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,206,045 bp | CP088692 |
| plasmid pB17EC0578-1: | 113,630 bp | CP088693 |
REBASE acronym: EcoC0578
Org_num: 53636
All begin LQQ70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24075 | endoribonuclease SymE | |||
| 24080 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0578ORF24090P |
| 24085 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0578ORF24090P |
| 24090 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0578ORF24090P |
| 24095 | restriction endonuclease | |||
| plasmid pB17EC0578-1 | ||||
| 25740 | IS1-like element IS1A family transposase | |||
| 25745 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0578ORF25745P | |
| 25750 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 470 | PerC family transcriptional regulator | |||
| 475 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0578ORF475P |
| 480 | LexA family transcriptional regulator | |||
| 515 | 95 aa hypothetical protein | |||
| 520 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0578ORF520P | |
| 525 | phage lysis protein EssD | |||
| 4185 | 71 aa hypothetical protein | |||
| 4190 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0578ORF4190P | |
| 4195 | helix-turn-helix domain-containing protein | |||
| 6465 | TrmB family transcriptional regulator | |||
| 6470 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0578ORF6470P |
| 6485 | DUF3927 family protein | |||
| 10015 | drug/metabolite exporter YedA | |||
| 10020 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0578DcmP |
| 10025 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0578DcmP |
| 10030 | phosphohydrolase | |||
| 13140 | PerC family transcriptional regulator | |||
| 13145 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0578ORF13145P |
| 13150 | DUF1382 family protein | |||
| 17500 | DNA-binding transcriptional regulator Fis | |||
| 17505 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0578ORF17505P |
| 17510 | DUF2556 family protein | |||
| 18100 | ribulose-phosphate 3-epimerase | |||
| 18105 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0578DamP |
| 18110 | cell division protein DamX | |||
| 19625 | BREX system P-loop protein BrxC | |||
| 19630 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0578ORF19630P |
| 19635 | BREX-1 system phosphatase PglZ type A | |||
| 22775 | conjugal transfer protein TraG N-terminal | |||
| 22780 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0578ORF22780P | |
| 22785 | R | EcosS3ORF15775P (100% identity) | EcoC0578ORF22780P | |
| 22790 | response regulator receiver domain | |||
| plasmid pB17EC0578-1 | ||||
| 25675 | 73 aa hypothetical protein | |||
| 25680 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0578ORF25680P |
| 25685 | 103 aa hypothetical protein | |||