Escherichia coli C17EC0264 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli C17EC0264 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,946,370 bp | CP088617 |
| plasmid pC17EC0264-1: | 155,727 bp | CP088618 |
| plasmid pC17EC0264-2: | 94,108 bp | CP088619 |
| plasmid pC17EC0264-3: | 67,933 bp | CP088620 |
REBASE acronym: EcoC0264
Org_num: 53664
All begin LQR28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20425 | adenine/cytosine-specific restriction | |||
| 20430 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoC0264ORF20435P |
| 20435 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoC0264ORF20435P |
| 20440 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoC0264ORF20435P |
| 20445 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2675 | DUF2556 family protein | |||
| 2680 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoC0264ORF2680P |
| 2685 | DNA-binding transcriptional regulator Fis | |||
| 9825 | phosphohydrolase | |||
| 9830 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoC0264DcmP |
| 9835 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoC0264DcmP |
| 9840 | drug/metabolite exporter YedA | |||
| plasmid pC17EC0264-1 | ||||
| 23795 | IS1 family transposase | |||
| 23800 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoC0264ORF23800P |
| 23805 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoC0264ORF23800P |
| 23810 | EAL domain-containing protein | |||
| 24345 | 73 aa hypothetical protein | |||
| 24350 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0264ORF24350P |
| 24355 | 103 aa hypothetical protein | |||
| plasmid pC17EC0264-2 | ||||
| 25110 | 103 aa hypothetical protein | |||
| 25115 | M | M.Sso866ORF27155P (100% identity) | M.EcoC0264ORF25115P | |
| 25120 | 73 aa hypothetical protein | |||
| plasmid pC17EC0264-3 | ||||
| 25510 | 103 aa hypothetical protein | |||
| 25515 | M | M.Sfl2142ORF380P (100% identity) | M.EcoC0264ORF25515P | |
| 25520 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20420 | GTPase | |||
| 20425 | R | Ssp28760MrrP (100% identity) | EcoC0264MrrP | |
| 20430 | type I restriction-modification system | |||
| 20445 | endoribonuclease SymE | |||
| 20450 | R | SenHNK130McrBP (100% identity) | EcoC0264McrBP | |
| 20455 | R | Ecoo241McrCP (100% identity) | EcoC0264McrCP | |