Escherichia coli E16EC0458 |
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Putative Escherichia coli E16EC0458 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,173,109 bp | CP088545 |
| plasmid pE16EC0458-1: | 69,248 bp | CP088546 |
REBASE acronym: EcoC0458
Org_num: 53722
All begin LQQ97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13360 | endoribonuclease SymE | |||
| 13365 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0458ORF13375P |
| 13370 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0458ORF13375P |
| 13375 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0458ORF13375P |
| 13380 | restriction endonuclease | |||
| 15445 | ash family protein | |||
| 15450 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0458ORF15455P |
| 15455 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0458ORF15455P |
| 15460 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0458ORF15455P |
| 15465 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pE16EC0458-1 | ||||
| 25505 | IS1-like element IS1A family transposase | |||
| 25510 | M | M.EcoEC0899ORF26310P (100% identity) | M.EcoC0458ORF25510P | |
| 25515 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2705 | PerC family transcriptional regulator | |||
| 2710 | M | M.Esp911AORF3194P (100% identity) | GATC | M.EcoC0458ORF2710P |
| 2715 | DUF1382 family protein | |||
| 6770 | DNA-binding transcriptional regulator Fis | |||
| 6775 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0458ORF6775P |
| 6780 | DUF2556 family protein | |||
| 8895 | BREX system P-loop protein BrxC | |||
| 8900 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoC0458ORF8900P |
| 8905 | BREX-1 system phosphatase PglZ type A | |||
| 12065 | conjugal transfer protein TraG N-terminal | |||
| 12070 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC0458ORF12070P | |
| 12075 | R | EcosS3ORF15775P (100% identity) | EcoC0458ORF12070P | |
| 12080 | response regulator receiver domain | |||
| 15230 | PerC family transcriptional regulator | |||
| 15235 | M | M.EcoEC0899ORF22010P (100% identity) | GATC | M.EcoC0458ORF15235P |
| 15240 | LexA family transcriptional regulator | |||
| 15275 | 95 aa hypothetical protein | |||
| 15280 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC0458ORF15280P | |
| 15285 | phage lysis protein EssD | |||
| 18920 | 71 aa hypothetical protein | |||
| 18925 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0458ORF18925P | |
| 18930 | helix-turn-helix domain-containing protein | |||
| 21230 | TrmB family transcriptional regulator | |||
| 21235 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0458ORF21235P |
| 21250 | DUF3927 family protein | |||
| 24790 | drug/metabolite exporter YedA | |||
| 24795 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0458DcmP |
| 24800 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0458DcmP |
| 24805 | phosphohydrolase | |||
| plasmid pE16EC0458-1 | ||||
| 25900 | 73 aa hypothetical protein | |||
| 25905 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0458ORF25905P |
| 25910 | 103 aa hypothetical protein | |||