Escherichia coli E16EC1059 |
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Putative Escherichia coli E16EC1059 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
Complete sequence: 5,202,555 bp
GenBank #: CP088496
REBASE acronym: EcoC1059
Org_num: 53737
All begin LQT87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1700 | restriction endonuclease | |||
| 1705 | M | M.EcoW072ORF20660P (100% identity) | GGYANNNNNGTNG | M.EcoC1059ORF1705P |
| 1710 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoC1059ORF1705P |
| 1715 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoC1059ORF1705P |
| 1720 | endoribonuclease SymE | |||
| 24905 | transcription factor | |||
| 24910 | M | M.EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | M.EcoC1059ORF24910P |
| 24915 | S | S.EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | S.EcoC1059ORF24910P |
| 24920 | DUF4433 domain-containing protein | |||
| 24925 | macro domain-containing protein | |||
| 24930 | R | EcoF16024ORF18990P (100% identity) | CCAYNNNNNGTNG | EcoC1059ORF24910P |
| 24935 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2250 | conjugal transfer protein TraG N-terminal | |||
| 2255 | M | M.EcosS3ORF15775P (100% identity) | M.EcoC1059ORF2255P | |
| 2260 | R | EcosS3ORF15775P (100% identity) | EcoC1059ORF2255P | |
| 2265 | response regulator receiver domain | |||
| 7640 | cell division protein DamX | |||
| 7645 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1059DamP |
| 7650 | ribulose-phosphate 3-epimerase | |||
| 8240 | DUF2556 family protein | |||
| 8245 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoC1059ORF8245P |
| 8250 | DNA-binding transcriptional regulator Fis | |||
| 12695 | DUF1382 family protein | |||
| 12700 | M | M.Sdy9753ORFBP (100% identity) | M.EcoC1059ORF12700P | |
| 12705 | PerC family transcriptional regulator | |||
| 15970 | phosphohydrolase | |||
| 15975 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC1059DcmP |
| 15980 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoC1059DcmP |
| 15985 | drug/metabolite exporter YedA | |||
| 22900 | 71 aa hypothetical protein | |||
| 22905 | M | M.Sen21974ORF23385P (100% identity) | M.EcoC1059ORF22905P | |
| 22910 | 145 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19815 | NinE family protein | |||
| 19820 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoC1059ORF19820P |
| 19825 | recombination protein NinB | |||