Escherichia coli E17EC0112 |
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Putative Escherichia coli E17EC0112 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,029,027 bp | CP088479 |
| plasmid pE17EC0112-1: | 122,660 bp | CP088480 |
REBASE acronym: EcoC0112
Org_num: 53742
All begin LQT76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2210 | endoribonuclease SymE | |||
| 2215 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC0112ORF2225P |
| 2220 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC0112ORF2225P |
| 2225 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC0112ORF2225P |
| 2230 | restriction endonuclease | |||
| 4030 | ash family protein | |||
| 4035 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoC0112ORF4040P |
| 4040 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoC0112ORF4040P |
| 4045 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoC0112ORF4040P |
| 4050 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pE17EC0112-1 | ||||
| 24850 | type II toxin-antitoxin system Phd/YefM family | |||
| 24855 | M | M.EcoEC0541ORF24730P (100% identity) | M.EcoC0112ORF24855P | |
| 24860 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | helix-turn-helix domain-containing protein | |||
| 1865 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC0112ORF1865P |
| 1870 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC0112ORF1865P |
| 1875 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC0112ORF1865P |
| 1880 | McrC family protein | |||
| 6855 | TraR/DksA family transcriptional regulator | |||
| 6860 | M | M.EcoEC0541ORF510P (100% identity) | M.EcoC0112ORF6860P | |
| 6865 | replication endonuclease | |||
| 7540 | 71 aa hypothetical protein | |||
| 7545 | M | M.KpnYN1ORFGP (89% identity) | M.EcoC0112ORF7545P | |
| 7550 | helix-turn-helix domain-containing protein | |||
| 9825 | TrmB family transcriptional regulator | |||
| 9830 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoC0112ORF9830P |
| 9845 | DUF3927 family protein | |||
| 13405 | drug/metabolite exporter YedA | |||
| 13410 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0112DcmP |
| 13415 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC0112DcmP |
| 13420 | phosphohydrolase | |||
| 20605 | DNA-binding transcriptional regulator Fis | |||
| 20610 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC0112ORF20610P |
| 20615 | DUF2556 family protein | |||
| 21215 | ribulose-phosphate 3-epimerase | |||
| 21220 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC0112DamP |
| 21225 | cell division protein DamX | |||
| plasmid pE17EC0112-1 | ||||
| 24910 | 103 aa hypothetical protein | |||
| 24915 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC0112ORF24915P |
| 24920 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1875 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 1880 | R | EcosS9McrCP (100% identity) | EcoC0112McrCP | |
| 1885 | R | EcosS3McrBP (100% identity) | EcoC0112McrBP | |
| 1890 | glycosyltransferase | |||