Escherichia coli F16EC0470 |
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Putative Escherichia coli F16EC0470 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 4,689,671 bp | CP088397 |
| plasmid pF16EC0470-2: | 81,842 bp | CP088399 |
REBASE acronym: EcoEC0470
Org_num: 53785
All begin LQT64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3850 | endoribonuclease SymE | |||
| 3855 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0470ORF3865P |
| 3860 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0470ORF3865P |
| 3865 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0470ORF3865P |
| 3870 | restriction endonuclease | |||
| 5675 | ash family protein | |||
| 5680 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0470ORF5685P |
| 5685 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0470ORF5685P |
| 5690 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0470ORF5685P |
| 5695 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pF16EC0470-2 | ||||
| 25300 | IS1-like element IS1A family transposase | |||
| 25305 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoEC0470ORF24805P |
| 24800 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoEC0470ORF24805P |
| 24805 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoEC0470ORF24805P |
| 24810 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3500 | helix-turn-helix domain-containing protein | |||
| 3505 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoEC0470ORF3505P |
| 3510 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoEC0470ORF3505P |
| 3515 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoEC0470ORF3505P |
| 3520 | McrC family protein | |||
| 9505 | TrmB family transcriptional regulator | |||
| 9510 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0470ORF9510P |
| 9525 | DUF3927 family protein | |||
| 13060 | drug/metabolite exporter YedA | |||
| 13065 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0470DcmP |
| 13070 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEC0470DcmP |
| 13075 | phosphohydrolase | |||
| 20225 | DNA-binding transcriptional regulator Fis | |||
| 20230 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0470ORF20230P |
| 20235 | DUF2556 family protein | |||
| 20835 | ribulose-phosphate 3-epimerase | |||
| 20840 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC0470DamP |
| 20845 | cell division protein DamX | |||
| plasmid pF16EC0470-2 | ||||
| 25240 | 73 aa hypothetical protein | |||
| 25245 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoEC0470ORF25245P |
| 25250 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3515 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 3520 | R | EcosS9McrCP (100% identity) | EcoEC0470McrCP | |
| 3525 | R | EcosS3McrBP (100% identity) | EcoEC0470McrBP | |
| 3530 | glycosyltransferase | |||