Escherichia coli F16EC0507 |
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Putative Escherichia coli F16EC0507 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 33366
| Sequence length: | GenBank #: | |
| Chromosome: | 5,260,815 bp | CP088393 |
| plasmid pF16EC0507-1: | 117,591 bp | CP088394 |
| plasmid pF16EC0507-2: | 106,968 bp | CP088395 |
REBASE acronym: EcoEC0507
Org_num: 53786
All begin LQQ89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4250 | endoribonuclease SymE | |||
| 4255 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoEC0507ORF4265P |
| 4260 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoEC0507ORF4265P |
| 4265 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoEC0507ORF4265P |
| 4270 | restriction endonuclease | |||
| 6070 | ash family protein | |||
| 6075 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoEC0507ORF6080P |
| 6080 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoEC0507ORF6080P |
| 6085 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoEC0507ORF6080P |
| 6090 | type IV toxin-antitoxin system AbiEi family | |||
| 25290 | type II toxin-antitoxin system RelB/DinJ family | |||
| 25295 | M | M.EcoEC0342ORF3455P (100% identity) | ACYNNNNNNGTTC | M.EcoEC0507ORF25295P |
| 25300 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.EcoEC0507ORF25295P |
| 25305 | R | Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | EcoEC0507ORF25295P |
| 25310 | 184 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2540 | conjugal transfer protein TraG N-terminal | |||
| 2545 | M | M.EcosS3ORF15775P (100% identity) | M.EcoEC0507ORF2545P | |
| 2550 | R | EcosS3ORF15775P (100% identity) | EcoEC0507ORF2545P | |
| 2555 | response regulator receiver domain | |||
| 3895 | helix-turn-helix domain-containing protein | |||
| 3900 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoEC0507ORF3900P |
| 3905 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoEC0507ORF3900P |
| 3910 | R | R1.EcoS4ORF17760P (100% identity) | GGTCTC | EcoEC0507ORF3900BP |
| 3915 | IS3-like element ISEc52 family transposase | |||
| 3920 | R | EcosS9ORF2810P (33% identity) | GGTCTC | EcoEC0507ORF3900AP |
| 3925 | McrC family protein | |||
| 9565 | 71 aa hypothetical protein | |||
| 9570 | M | M.KpnYN1ORFGP (89% identity) | M.EcoEC0507ORF9570P | |
| 9575 | helix-turn-helix domain-containing protein | |||
| 11845 | TrmB family transcriptional regulator | |||
| 11850 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoEC0507ORF11850P |
| 11865 | DUF3927 family protein | |||
| 14840 | TrmB family transcriptional regulator | |||
| 14845 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoEC0507ORF14855P |
| 14850 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoEC0507ORF14855P |
| 14855 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoEC0507ORF14855P |
| 14860 | antitermination protein | |||
| 15725 | drug/metabolite exporter YedA | |||
| 15730 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoEC0507DcmP |
| 15735 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoEC0507DcmP |
| 15740 | phosphohydrolase | |||
| 23185 | DNA-binding transcriptional regulator Fis | |||
| 23190 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoEC0507ORF23190P |
| 23195 | DUF2556 family protein | |||
| 23785 | ribulose-phosphate 3-epimerase | |||
| 23790 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEC0507DamP |
| 23795 | cell division protein DamX | |||
| plasmid pF16EC0507-1 | ||||
| 25980 | 103 aa hypothetical protein | |||
| 25985 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoEC0507ORF25985P | |
| 25990 | 73 aa hypothetical protein | |||
| plasmid pF16EC0507-2 | ||||
| 26880 | 103 aa hypothetical protein | |||
| 26885 | M | M.SflC32ORFDP (100% identity) | SAY | M.EcoEC0507ORF26885P |
| 26890 | 73 aa hypothetical protein | |||