Escherichia coli 811035 |
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Putative Escherichia coli 811035 RM systems
Ref: Greig,D.R. et al. unpublished
REBASE ref # 33271
| Sequence length: | GenBank #: | |
| Chromosome: | 5,554,812 bp | CP088026 |
| plasmid p811035: | 95,367 bp | CP088027 |
REBASE acronym: Eco811035
Org_num: 53576
All begin F8Z73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3395 | endoribonuclease SymE | |||
| 3400 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco811035ORF3405P |
| 3405 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco811035ORF3405P |
| 3410 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco811035ORF3405P |
| 3415 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3120 | transposase | |||
| 3125 | R | Ecos1613ORF26795P (100% identity) | Eco811035ORF3125P | |
| 3130 | N-acetylneuraminic acid mutarotase | |||
| 3160 | DEAD/DEAH box helicase | |||
| 3165 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco811035ORF3165P |
| 11500 | epoxyqueuosine reductase QueH | |||
| 11505 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M1.Eco811035ORF11505P |
| 11510 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco811035ORF11505P |
| 11515 | 90 aa hypothetical protein | |||
| 11520 | DUF968 domain-containing protein | |||
| 11525 | RusA family crossover junction | |||
| 11530 | antitermination protein | |||
| 11535 | TrmB family transcriptional regulator | |||
| 11540 | M | M.EcoZ910ORF13805P (100% identity) | M2.Eco811035ORF11505P | |
| 11545 | DUF1737 domain-containing protein | |||
| 13235 | DUF1737 domain-containing protein | |||
| 13250 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco811035ORF13250P | |
| 13255 | TrmB family transcriptional regulator | |||
| 15785 | drug/metabolite exporter YedA | |||
| 15790 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco811035DcmP |
| 15795 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco811035DcmP |
| 15800 | phosphohydrolase | |||
| 17890 | NinE family protein | |||
| 17895 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco811035ORF17895P |
| 17900 | recombination protein NinB | |||
| 20360 | NinE family protein | |||
| 20365 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco811035ORF20365P |
| 20370 | recombination protein NinB | |||
| 25260 | DNA-binding transcriptional regulator Fis | |||
| 25265 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco811035ORF25265P |
| 25270 | DUF2556 family protein | |||
| 25775 | ribulose-phosphate 3-epimerase | |||
| 25780 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco811035DamP |
| 25785 | cell division protein DamX | |||
| plasmid p811035 | ||||
| 28245 | 101 aa hypothetical protein | |||
| 28250 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco811035ORF28250P | |
| 28255 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3380 | DUF1127 domain-containing protein | |||
| 3385 | R | Ecos1613GmrSP (100% identity) | Eco811035GmrSP | |
| 3390 | R | EcosPA8GmrSDP (55% identity) | Eco811035GmrDP | |
| 3395 | endoribonuclease SymE | |||