Lactobacillus gasseri Lg1199 |
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Putative Lactobacillus gasseri Lg1199 RM systems
Ref: Shipman,B.M. et al. unpublished
REBASE ref # 33527
Complete sequence: 1,928,547 bp
GenBank #: CP087959
REBASE acronym: Lga1199
Org_num: 54440
All begin LP362_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5240 | ion channel | |||
| 5245 | S | S.LsaAR809ORF8845P (23% identity) | S3.Lga1199ORF5265P | |
| 5250 | S | S2.LgaL5ORF3875P (55% identity) | S2.Lga1199ORF5265P | |
| 5255 | site-specific integrase | |||
| 5260 | S | S2.LjoMR1ORF320P (33% identity) | S1.Lga1199ORF5265P | |
| 5265 | M | M.LjoKD1ORF5330P (86% identity) | M.Lga1199ORF5265P | |
| 5270 | R | LspJM1ORF5725P (97% identity) | Lga1199ORF5265P | |
| 5275 | DUF3800 domain-containing protein | |||
| 7105 | beta-lactamase family protein | |||
| 7110 | R | Lga9ORF3030P (99% identity) | Lga1199ORF7135P | |
| 7115 | S | S3.Lga9ORF3030P (99% identity) | S3.Lga1199ORF7135P | |
| 7120 | S | S2.Lga9ORF3030P (100% identity) | S2.Lga1199ORF7135P | |
| 7125 | tyrosine-type recombinase/integrase | |||
| 7130 | S | S1.Lga637ORF6910P (46% identity) | S1.Lga1199ORF7135P | |
| 7135 | M | M.Lga637ORF6910P (98% identity) | M.Lga1199ORF7135P | |
| 7140 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 180 | exodeoxyribonuclease III | |||
| 185 | R | Lga9ORF200P (100% identity) | Lga1199ORF185P | |
| 190 | alpha/beta hydrolase | |||