Escherichia coli OSUCMP42NDM |
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Putative Escherichia coli OSUCMP42NDM RM systems
Ref: Ballasha,G.A. unpublished
REBASE ref # 33398
| Sequence length: | GenBank #: | |
| Chromosome: | 4,853,432 bp | CP087578 |
| plasmid pCMP42-2: | 51,705 bp | CP087576 |
REBASE acronym: Eco42NDM
Org_num: 53861
All begin KUA31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3760 | endoribonuclease SymE | |||
| 3765 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco42NDMORF3770P |
| 3770 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco42NDMORF3770P |
| 3775 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | Eco42NDMORF3770P |
| 3780 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5545 | DEAD/DEAH box helicase | |||
| 5550 | RM | SflLIN17ORF3140P (100% identity) | Eco42NDMORF5550P | |
| 5555 | transposase | |||
| 14180 | drug/metabolite exporter YedA | |||
| 14185 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Eco42NDMDcmP |
| 14190 | M | M.EcoteDDcmP (100% identity) | CCWGG | M.Eco42NDMDcmP |
| 14195 | phosphohydrolase | |||
| 21185 | DNA-binding transcriptional regulator Fis | |||
| 21190 | M | M.Ecod6c8ORFAP (100% identity) | ATGCAT | M.Eco42NDMORF21190P |
| 21195 | DUF2556 family protein | |||
| 21740 | ribulose-phosphate 3-epimerase | |||
| 21745 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco42NDMDamP |
| 21750 | cell division protein DamX | |||
| plasmid pCMP42-2 | ||||
| 115 | 73 aa hypothetical protein | |||
| 120 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco42NDMORF120P |
| 125 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3775 | type I restriction-modification system | |||
| 3780 | R | Ssp28760MrrP (100% identity) | Eco42NDMMrrP | |
| 3785 | GTPase | |||