Nocardia farcinica SZ 1509 |
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Putative Nocardia farcinica SZ 1509 RM systems
Ref: Li,Z. and Che,Y. unpublished
REBASE ref # 33626
| Sequence length: | GenBank #: | |
| Chromosome: | 6,229,422 bp | CP086599 |
| plasmid unnamed1: | 141,833 bp | CP086600 |
| plasmid unnamed3: | 86,913 bp | CP086602 |
| plasmid unnamed4: | 90,525 bp | CP086603 |
REBASE acronym: Nfa1509
Org_num: 54753
All begin LMJ57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13035 | alpha/beta hydrolase | |||
| 13040 | M | M.Nsp372II (100% identity) | GACNNNNNNTGGT | M.Nfa1509I |
| 13045 | S | S.Nsp372II (100% identity) | GACNNNNNNTGGT | S.Nfa1509I |
| 13050 | winged helix-turn-helix domain-containing | |||
| 13055 | restriction endonuclease | |||
| 13060 | ATP-binding protein | |||
| 13065 | R | Nsp372IIP (100% identity) | GACNNNNNNTGGT | Nfa1509IP |
| 13075 | beta-phosphoglucomutase family hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 960 | DUF998 domain-containing protein | |||
| 965 | V | V.Nsp372ORF23150P (100% identity) | V.Nfa1509ORF970P | |
| 970 | M | M.Nsp372ORF23150P (100% identity) | M.Nfa1509ORF970P | |
| 975 | glycolipid-binding domain-containing | |||
| 7445 | nitroreductase | |||
| 7450 | M | M.Nsp372I (100% identity) | ATCGAT | M.Nfa1509II |
| 7455 | TetR/AcrR family transcriptional regulator | |||
| 17590 | DUF3883 domain-containing protein | |||
| ??? | M | M.Nsp372ORF11135P (100% identity) | M.Nfa1509ORF17600P | |
| 17605 | DUF499 domain-containing protein | |||
| 22510 | protein kinase | |||
| 22515 | S | S.Nsp372III (100% identity) | CCAGNNNNTCC | S.Nfa1509III |
| 22520 | M | M.Nsp372III (94% identity) | CCAGNNNNTCC | M.Nfa1509III |
| 22525 | aminoglycoside phosphotransferase family | |||
| plasmid unnamed1 | ||||
| 29685 | 80 aa hypothetical protein | |||
| 29690 | M | M.NfaORF1100P (99% identity) | M.Nfa1509ORF29690P | |
| 29695 | 325 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 30445 | 67 aa hypothetical protein | |||
| 30450 | M | M.Nsp372ORF29575P (99% identity) | M.Nfa1509ORF30450P | |
| 30455 | phage Gp37/Gp68 family protein | |||
| plasmid unnamed4 | ||||
| 31120 | 219 aa hypothetical protein | |||
| 31125 | M | M.Nsp99ORF35205P (72% identity) | M.Nfa1509ORF31125P | |
| 31130 | 160 aa hypothetical protein | |||