Acidithiobacillus ferriphilus GT2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Acidithiobacillus ferriphilus GT2 RM systems
Ref: Guzman,M. et al. unpublished
REBASE ref # 33090
| Sequence length: | GenBank #: | |
| Chromosome: | 2,524,963 bp | CP080536 |
| plasmid pGT2: | 14,357 bp | CP080537 |
REBASE acronym: AfeGT2
Org_num: 52782
All begin K1Y48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9780 | toxin-antitoxin system toxin component, | |||
| 9785 | R | Ach8003IIP (92% identity) | AfeGT2ORF9800P | |
| 9790 | 399 aa hypothetical protein | |||
| 9795 | S | S.Kox9149II (57% identity) | S.AfeGT2ORF9800P | |
| 9800 | M | M.Pla190ORF23115P (92% identity) | M.AfeGT2ORF9800P | |
| 9805 | DNA polymerase IV | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4380 | transposase domain-containing protein | |||
| 4385 | M | M.AfeYQN3ORF10090P (42% identity) | M.AfeGT2ORF4385P | |
| 4390 | 107 aa hypothetical protein | |||
| plasmid pGT2 | ||||
| 12715 | tyrosine-type recombinase/integrase | |||
| 12720 | M | M.Afa89ORFEP (74% identity) | M.AfeGT2ORF12720P | |
| 12725 | R | MpsM2ORF4410P (76% identity) | AfeGT2ORF12720P | |
| 12730 | 78 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4345 | single-stranded DNA-binding protein | |||
| 4350 | R | Dsp964ORF3091P (74% identity) | AfeGT2ORF4360P | |
| 4355 | ATP-binding protein | |||
| 4360 | M | M.SspU334ORF17250P (45% identity) | M.AfeGT2ORF4360P | |
| 4365 | protein kinase | |||
| 5550 | AAA family ATPase | |||
| 5555 | M | M.AspYTS05ORF12785P (78% identity) | M.AfeGT2ORF5555P | |
| 5560 | R | AfeYQN3ORF14745P (83% identity) | AfeGT2ORF5555P | |
| 5570 | 296 aa hypothetical protein | |||
| 8365 | porin | |||
| 8370 | R | Gsp9736ORF862P (76% identity) | AfeGT2ORF8375P | |
| 8375 | M | M.AspNO1ORF22341P (75% identity) | M.AfeGT2ORF8375P | |
| 8380 | 152 aa hypothetical protein | |||