Escherichia coli SCPM-O-B-9427 |
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Putative Escherichia coli SCPM-O-B-9427 RM systems
Ref: Kartsev,N. et al. unpublished
REBASE ref # 33405
| Sequence length: | GenBank #: | |
| Chromosome: | 5,268,110 bp | CP086259 |
| plasmid pB-9427-1: | 83,340 bp | CP086260 |
REBASE acronym: Eco9427
Org_num: 53890
All begin LMH79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21685 | DUF262 domain-containing HNH endonuclease family | |||
| 21690 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco9427ORF21695P |
| 21695 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco9427ORF21695P |
| 21700 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco9427ORF21695P |
| 21705 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2130 | cell division protein DamX | |||
| 2135 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9427DamP |
| 2140 | ribulose-phosphate 3-epimerase | |||
| 2685 | DUF2556 family protein | |||
| 2690 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco9427ORF2690P |
| 2695 | DNA-binding transcriptional regulator Fis | |||
| 10795 | TrmB family transcriptional regulator | |||
| 10800 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco9427ORF10800P |
| 10820 | DUF3927 family protein | |||
| 14795 | LexA family transcriptional regulator | |||
| 14800 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9427ORF14800P |
| 14805 | PerC family transcriptional regulator | |||
| 15370 | drug/metabolite exporter YedA | |||
| 15375 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco9427DcmP |
| 15380 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco9427DcmP |
| 15385 | phosphohydrolase | |||
| 16375 | LexA family transcriptional regulator | |||
| 16380 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco9427ORF16380P |
| 16385 | R | Sso1099IP (100% identity) | CTGCAG | Eco9427ORF16380P |
| 16390 | Rha family transcriptional regulator | |||
| 16475 | regulator | |||
| 16480 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco9427ORF16480P |
| 16485 | DUF1382 family protein | |||
| 22160 | 126 aa hypothetical protein | |||
| 22165 | R | Ecou021ORF20225P (100% identity) | Eco9427ORF22165P | |
| 22170 | 97 aa hypothetical protein | |||
| plasmid pB-9427-1 | ||||
| 26025 | 73 aa hypothetical protein | |||
| 26030 | M | M.EcopO26ORF90P (100% identity) | M.Eco9427ORF26030P | |
| 26035 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4595 | 97 aa hypothetical protein | |||
| 4600 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco9427ORF4605P |
| 4605 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco9427ORF4605P |
| 4610 | S8 family peptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22700 | zinc-ribbon domain-containing protein | |||
| 22705 | R | Kpn0718McrBP (100% identity) | Eco9427McrBP | |
| 22710 | R | Eco895McrCP (100% identity) | Eco9427McrCP | |
| 22715 | IS3 family transposase | |||