Salmonella enterica subsp. enterica serovar Enteritidis Charmeleon |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis Charmeleon RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,713,642 bp
GenBank #: CP085822
REBASE acronym: SenChar
Org_num: 55204
All begin LJF58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13895 | NERD domain-containing protein/DEAD/DEAH box | |||
| 13900 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenCharORF13900P |
| 13905 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenCharORF13900P |
| 13910 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenCharORF13900P |
| 13915 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3365 | PerC family transcriptional regulator | |||
| 3370 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenCharORF3370P |
| 3375 | RusA family crossover junction | |||
| 8275 | drug/metabolite exporter YedA | |||
| 8280 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenCharDcmP |
| 8285 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenCharDcmP |
| 8290 | phosphohydrolase | |||
| 14025 | YebC/PmpR family DNA-binding transcriptional | |||
| 14030 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenCharORF14030P |
| 14035 | IS3 family transposase | |||
| 18950 | cell division protein DamX | |||
| 18955 | M | M.StyTDamP (100% identity) | GATC | M.SenCharDamP |
| 18960 | ribulose-phosphate 3-epimerase | |||
| 19440 | DUF2556 family protein | |||
| 19445 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenCharORF19445P |
| 19450 | DNA-binding transcriptional regulator Fis | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22625 | 3-5 exonuclease | |||
| 22630 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenCharORF22630P |
| 22635 | replication endonuclease | |||