Salmonella enterica subsp. enterica serovar Enteritidis Marill |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis Marill RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,713,509 bp
GenBank #: CP085806
REBASE acronym: SenMar
Org_num: 55215
All begin LJF46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | endonuclease NucS | |||
| 1825 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenMarORF1835P |
| 1830 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenMarORF1835P |
| 1835 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenMarORF1835P |
| 1840 | NERD domain-containing protein/DEAD/DEAH box | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1700 | IS3 family transposase | |||
| 1705 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenMarORF1705P |
| 1710 | YebC/PmpR family DNA-binding transcriptional | |||
| 7445 | phosphohydrolase | |||
| 7450 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenMarDcmP |
| 7455 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenMarDcmP |
| 7460 | drug/metabolite exporter YedA | |||
| 12360 | RusA family crossover junction | |||
| 12365 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenMarORF12365P |
| 12370 | PerC family transcriptional regulator | |||
| 19255 | DNA-binding transcriptional regulator Fis | |||
| 19260 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenMarORF19260P |
| 19265 | DUF2556 family protein | |||
| 19745 | ribulose-phosphate 3-epimerase | |||
| 19750 | M | M.StyTDamP (100% identity) | GATC | M.SenMarDamP |
| 19755 | cell division protein DamX | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16070 | replication endonuclease | |||
| 16075 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenMarORF16075P |
| 16080 | 3-5 exonuclease | |||