Salmonella enterica subsp. enterica serovar Enteritidis Poochyena |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis Poochyena RM systems
Ref: Huang,Y.T. unpublished
REBASE ref # 31747
Complete sequence: 4,713,645 bp
GenBank #: CP085793
REBASE acronym: SenPoo
Org_num: 55219
All begin LJF61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2555 | endonuclease NucS | |||
| 2560 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenPooORF2570P |
| 2565 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenPooORF2570P |
| 2570 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenPooORF2570P |
| 2575 | NERD domain-containing protein/DEAD/DEAH box | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2435 | IS3 family transposase | |||
| 2440 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenPooORF2440P |
| 2445 | YebC/PmpR family DNA-binding transcriptional | |||
| 8170 | phosphohydrolase | |||
| 8175 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenPooDcmP |
| 8180 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenPooDcmP |
| 8185 | drug/metabolite exporter YedA | |||
| 13080 | RusA family crossover junction | |||
| 13085 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenPooORF13085P |
| 13090 | PerC family transcriptional regulator | |||
| 19975 | DNA-binding transcriptional regulator Fis | |||
| 19980 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenPooORF19980P |
| 19985 | DUF2556 family protein | |||
| 20465 | ribulose-phosphate 3-epimerase | |||
| 20470 | M | M.StyTDamP (100% identity) | GATC | M.SenPooDamP |
| 20475 | cell division protein DamX | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16790 | replication endonuclease | |||
| 16795 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenPooORF16795P |
| 16800 | 3-5 exonuclease | |||