Escherichia coli fEC.1 |
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Putative Escherichia coli fEC.1 RM systems
Ref: Si,H. and Zhang,X. unpublished
REBASE ref # 33418
Complete sequence: 4,799,936 bp
GenBank #: CP085638
REBASE acronym: EcofEC1
Org_num: 53957
All begin LJX82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2205 | endoribonuclease SymE | |||
| 2210 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcofEC1ORF2215P |
| 2215 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcofEC1ORF2215P |
| 2220 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcofEC1ORF2215P |
| 2225 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6540 | recombination protein NinB | |||
| 6545 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcofEC1ORF6545P |
| 6550 | NinE family protein | |||
| 6595 | TrmB family transcriptional regulator | |||
| 6600 | M | M.EcoWH46ORF21100P (100% identity) | M.EcofEC1ORF6600P | |
| 6605 | phage lysis protein EssD | |||
| 8680 | PerC family transcriptional regulator | |||
| 8685 | M | M.EcoD6117ORF2145P (100% identity) | GATC | M.EcofEC1ORF8685P |
| 8690 | LexA family transcriptional regulator | |||
| 13360 | drug/metabolite exporter YedA | |||
| 13365 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcofEC1DcmP |
| 13370 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcofEC1DcmP |
| 13375 | phosphohydrolase | |||
| 19775 | DNA-binding transcriptional regulator Fis | |||
| 19780 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcofEC1ORF19780P |
| 19785 | DUF2556 family protein | |||
| 20305 | ribulose-phosphate 3-epimerase | |||
| 20310 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcofEC1DamP |
| 20315 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2190 | DUF1127 domain-containing protein | |||
| 2195 | R | SflLIN8GmrSDP (42% identity) | EcofEC1GmrSP | |
| 2200 | R | Ecos673GmrDP (100% identity) | EcofEC1GmrDP | |
| 2205 | endoribonuclease SymE | |||