Citrobacter freundii Cf.1 |
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Putative Citrobacter freundii Cf.1 RM systems
Ref: Si,H. and Ma,M. unpublished
REBASE ref # 33243
Complete sequence: 5,153,556 bp
GenBank #: CP085642
REBASE acronym: CfrCf1
Org_num: 53174
All begin LJX96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3705 | 112 aa hypothetical protein | |||
| 3710 | R | Cfr355ORF20215P (100% identity) | CfrCf1ORF3730P | |
| 3715 | S | S.Cfr2084ORF22190P (84% identity) | S2.CfrCf1ORF3730P | |
| 3720 | IS5-like element ISKpn26 family transposase | |||
| 3725 | S | S.KvaX39ORF28705P (16% identity) | S1.CfrCf1ORF3730P | |
| 3730 | M | M.Cfr2084ORF22190P (100% identity) | M.CfrCf1ORF3730P | |
| 3735 | DUF262 domain-containing protein | |||
| 9875 | 380 aa hypothetical protein | |||
| 9880 | M | M.Eco2097ORF1792P (98% identity) | M.CfrCf1ORF9880P | |
| 9885 | S | S.LadJ656ORF14135P (51% identity) | S.CfrCf1ORF9880P | |
| 9890 | R | Eco2144ORFGP (98% identity) | CfrCf1ORF9880P | |
| 9895 | M48 family metallopeptidase | |||
| 21120 | BrnT family toxin | |||
| 21125 | M | M.Cpo1222ORF5270P (75% identity) | M.CfrCf1ORF21125P | |
| 21130 | DEAD/DEAH box helicase family protein | |||
| 22360 | DUF262 domain-containing protein | |||
| 22365 | M | M.EcoF719ORF7800P (99% identity) | M.CfrCf1ORF22365P | |
| 22370 | S | S.EcoK2921ORF21790P (66% identity) | S.CfrCf1ORF22365P | |
| 22375 | R | EcoF719ORF7800P (99% identity) | CfrCf1ORF22365P | |
| 22380 | 388 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1565 | cell division protein DamX | |||
| 1570 | M | M.Eco11104DamP (100% identity) | GATC | M.CfrCf1DamP |
| 1575 | ribulose-phosphate 3-epimerase | |||
| 2115 | DUF2556 family protein | |||
| 2120 | M | M.CspMGH105ORFEP (100% identity) | ATGCAT | M.CfrCf1ORF2120P |
| 2125 | DNA-binding transcriptional regulator Fis | |||
| 6370 | 59 aa hypothetical protein | |||
| 6375 | M | M.SenWT5ORF6820P (97% identity) | M1.CfrCf1ORF6375P | |
| 6380 | M | M.Cfr915ORF6685P (93% identity) | M2.CfrCf1ORF6375P | |
| 6385 | DUF1317 domain-containing protein | |||
| 9580 | phosphohydrolase | |||
| 9585 | M | M.CspC108ORFGP (100% identity) | CCWGG | M.CfrCf1ORF9585P |
| 9590 | V | V.CyoL6ORF9385P (99% identity) | V.CfrCf1ORF9585P | |
| 9595 | drug/metabolite exporter YedA | |||
| 21340 | NAD(P)/FAD-dependent oxidoreductase | |||
| 21345 | R | Cpo22CZORF21070P (97% identity) | CfrCf1ORF21345P | |
| 21350 | McrC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14715 | integrase arm-type DNA-binding domain-containing | |||
| 14720 | M | M.CbrC17ORF8300P (99% identity) | GCGCAG | M.CfrCf1ORF14720P |
| 14725 | R | CspJZ38ORFAP (96% identity) | GCGCAG | CfrCf1ORF14720P |
| 14730 | prepilin-type N-terminal cleavage/methylation | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21345 | HNH endonuclease | |||
| 21350 | R | Ysp713McrCP (91% identity) | CfrCf1McrCP | |
| 21355 | R | SmaUMH11McrBP (94% identity) | CfrCf1McrBP | |
| 21360 | DUF4942 domain-containing protein | |||