Phocaeicola vulgatus MG01-10 |
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Putative Phocaeicola vulgatus MG01-10 RM systems
Ref: Tanaka,K. et al. unpublished
REBASE ref # 33662
Complete sequence: 4,957,189 bp
GenBank #: AP025240
REBASE acronym: Pvu0110
Org_num: 54842
All begin GAIMETA21S10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39450 | S | S5.Pvu0103ORF40560P (100% identity) | S5.Pvu0110ORF39490P | |
| 39460 | integrase | |||
| ??? | S | S3.Pvu3C24ORF1046P (100% identity) | S4.Pvu0110ORF39490P | |
| ??? | S | S2.Pvu1098ORF7795P (100% identity) | GAAGNNNNNNNTCC | S3.Pvu0110ORF39490P |
| ??? | S | S2.Pvu0103ORF40560P (100% identity) | GAAGNNNNNNNTCC | S2.Pvu0110ORF39490P |
| 39480 | S | S1.Pvu0107ORF39730P (100% identity) | S1.Pvu0110ORF39490P | |
| 39490 | M | M.Pvu0107ORF39730P (100% identity) | M.Pvu0110ORF39490P | |
| 39500 | R | Pvu0107ORF39730P (100% identity) | Pvu0110ORF39490P | |
| 39510 | 579 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5720 | 240 aa hypothetical protein | |||
| 5730 | M | M2.Pvu0107ORF35130P (100% identity) | M1.Pvu0110ORF5730P | |
| 5740 | DUF5045 domain-containing protein | |||
| 5750 | 377 aa hypothetical protein | |||
| 5760 | conjugative transposon protein TraK | |||
| 5770 | 119 aa hypothetical protein | |||
| 5780 | conjugative transposon protein TraM | |||
| 5790 | 119 aa hypothetical protein | |||
| 5800 | M | M1.Pvu0107ORF35130P (100% identity) | M2.Pvu0110ORF5730P | |
| 5810 | conjugative transposon protein TraN | |||
| 28650 | 115 aa hypothetical protein | |||
| 28660 | M | M.Pvu0107ORF27210P (100% identity) | M.Pvu0110ORF28660P | |
| 28670 | 77 aa hypothetical protein | |||
| 28750 | 139 aa hypothetical protein | |||
| 28760 | M | M.Pvu0107ORF27310P (100% identity) | M.Pvu0110ORF28760P | |
| 28770 | 178 aa hypothetical protein | |||
| 35260 | 747 aa hypothetical protein | |||
| 35270 | R | Pvu0107ORF35510P (100% identity) | Pvu0110ORF35280P | |
| 35280 | M | M.Pvu0107ORF35510P (100% identity) | M.Pvu0110ORF35280P | |
| 35290 | C | C.Pvu0107ORF35510P (100% identity) | C.Pvu0110ORF35280P | |
| 35300 | 200 aa hypothetical protein | |||
| 35300 | 200 aa hypothetical protein | |||
| 35310 | RM | Pvu0107ORF35540P (100% identity) | Pvu0110ORF35310P | |
| 35320 | 117 aa hypothetical protein | |||