Aeromonas caviae 71485 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Aeromonas caviae 71485 RM systems
Ref: Weng,X.-B. unpublished
REBASE ref # 28097
Complete sequence: 4,600,517 bp
GenBank #: CP085468
REBASE acronym: Aca71485
Org_num: 52839
All begin LEO80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8540 | DUF559 domain-containing protein | |||
| 8545 | R | Aja3036ORF1640P (100% identity) | Aca71485ORF8545P | |
| 8550 | M48 family metallopeptidase | |||
| 12725 | M48 family metallopeptidase | |||
| 12730 | R | Ave14022ORFDP (97% identity) | Aca71485ORF12750P | |
| 12735 | 160 aa hypothetical protein | |||
| 12740 | ATP-binding protein | |||
| 12745 | S | S.Ave14022ORFDP (62% identity) | S1.Aca71485ORF12750P | |
| 12750 | M | M.AspNIH1ORF17530P (98% identity) | M.Aca71485ORF12750P | |
| 12755 | S | S2.AcaK524ORF8955P (99% identity) | S2.Aca71485ORF12750P | |
| 12760 | aminomethyl-transferring glycine dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5485 | SPOR domain-containing protein | |||
| 5490 | M | M.AspWP2DamP (100% identity) | GATC | M.Aca71485DamP |
| 5495 | ribulose-phosphate 3-epimerase | |||
| 20055 | integrase core domain-containing protein | |||
| 20060 | R | AveWP2DptGP (52% identity) | Aca71485DptGP | |
| 20065 | DNA phosphorothioation-dependent restriction | |||
| 20060 | DNA phosphorothioation-dependent restriction | |||
| 20065 | R | Aca1520DptFP (70% identity) | Aca71485DptFBP | |
| 20070 | IS21-like element helper ATPase IstB | |||
| 20075 | IS21 family transposase | |||
| 20080 | R | AveWP2DptFP (23% identity) | Aca71485DptFAP | |
| 20095 | 966 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3935 | DUF4276 family protein | |||
| 3940 | M | M.Sen59884ORF2060P (77% identity) | M.Aca71485ORF3940P | |
| 3945 | R | Ave16989ORFDP (98% identity) | Aca71485ORF3940P | |
| 3950 | DNA-binding transcriptional regulator Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12000 | J domain-containing protein | |||
| 12005 | R | Ave1906ORF12530P (98% identity) | Aca71485ORF12005P | |
| 12010 | class I SAM-dependent methyltransferase | |||