Ref: Copeland,A. et al. unpublished

REBASE ref # 9690

Sequence length:GenBank #:
Chromosome: 4,712,337 bp CP000267 (NC_007908)
plasmid1: 257,447 bp CP000268 (NC_007901)

REBASE acronym: RfeD

Org_num: 4288

 

All begin Rfer_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
27 protein of unknown function DUF296
28 R HspLS2ORF11250P (0% identity) RfeDORF32P
29 377 aa hypothetical protein
30 S S.Tte58ORF2655P (0% identity) S.RfeDORF32P
31 protein of unknown function DUF1016
32 M M.HspLS2ORF11250P (0% identity) M.RfeDORF32P
33 91 aa hypothetical protein
 
1058 478 aa hypothetical protein
1059 M M.PspCG912ORFIP (0% identity) M.RfeDORF1059P
1060 S S.DauHRMORF14690P (0% identity) S.RfeDORF1059P
1061 protein of unknown function DUF262
1062 R PspCG912ORFIP (0% identity) RfeDORF1059P
1063 thymidylate synthase
 
1364 65 aa hypothetical protein
1365 M M.BspPML1ORF5770P (0% identity) M.RfeDORF1365P
1366 S S.Btr192III (0% identity) S.RfeDORF1365P
1367 R BspPML1ORF5770P (0% identity) RfeDORF1365P
1368 206 aa hypothetical protein
 
4005 610 aa conserved hypothetical protein
4006 M M.SspAH1ORF1240P (0% identity) M.RfeDORF4006P
4007 S S.PveR4ORFHP (0% identity) S.RfeDORF4006P
4008 232 aa hypothetical protein
4009 340 aa conserved hypothetical protein
4010 R SspAH1ORF1240P (0% identity) RfeDORF4006P
4011 transcriptional regulator, LysR family
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
1821 transcriptional regulator, XRE family
1822 M M.EsaNPORF29P (0% identity) M.RfeDORF1822P
1823 glutaminyl-tRNA synthetase
 
3074 594 aa hypothetical protein
3075 V V.Xsp727ORF546P (0% identity) V.RfeDORF3077P
3076 227 aa hypothetical protein
3077 M M.Jag9628ORF4256P (0% identity) M.RfeDORF3077P
3078 359 aa hypothetical protein
 
plasmid1
 
4326 95 aa hypothetical protein
4327 RM HspPBLH3ORF22095P (0% identity) RfeDORF4327P
4328 phage integrase
 
4480 77 aa hypothetical protein
4481 M M.Xeu930ORF100P (0% identity) M.RfeDORF4481P
4482 148 aa conserved hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
1818 protein of unknown function DUF1332
1819 R VboJ1MrrP (0% identity) RfeDMrrP
1820 pseudogene