Klebsiella pneumoniae SB1139 |
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Putative Klebsiella pneumoniae SB1139 RM systems
Ref: Hawkey,J. et al. unpublished
REBASE ref # 33463
Complete sequence: 5,385,248 bp
GenBank #: CP084859
REBASE acronym: KpnSB1139
Org_num: 54288
All begin LGM11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23425 | TGBp1 family protein | |||
| 23430 | R | Kpnrf22ORF44100P (100% identity) | CTAYNANNNNNRTCC | KpnSB1139ORF23435P |
| 23435 | M | M.Kpnu28ORF24465P (100% identity) | CTAYNANNNNNRTCC | M.KpnSB1139ORF23435P |
| 23440 | S | S.Kpnu28ORF24465P (100% identity) | CTAYNANNNNNRTCC | S.KpnSB1139ORF23435P |
| 23445 | nuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3275 | TraR/DksA family transcriptional regulator | |||
| 3280 | M | M.KpnVH12ORF3425P (99% identity) | M.KpnSB1139ORF3280P | |
| 3285 | replication endonuclease | |||
| 3300 | ribbon-helix-helix protein, CopG family | |||
| 3305 | M | M.Kpn0077ORF5960P (99% identity) | M.KpnSB1139ORF3305P | |
| 3310 | R | Kpn0077ORF5960P (100% identity) | GGCGCC | KpnSB1139ORF3305P |
| 3315 | phage portal protein | |||
| 9220 | cell division protein DrpB | |||
| ??? | M | M.KpnT69DcmP (100% identity) | M.KpnSB1139DcmP | |
| 9235 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnSB1139DcmP |
| 9240 | drug/metabolite exporter YedA | |||
| 14375 | RusA family crossover junction | |||
| 14380 | M | M.Kpn39ORF10290P (98% identity) | M.KpnSB1139ORF14380P | |
| 14385 | helix-turn-helix domain-containing protein | |||
| 14430 | 78 aa hypothetical protein | |||
| 14435 | M | M.KpnSB617ORF14890P (100% identity) | M.KpnSB1139ORF14435P | |
| 14440 | ead/Ea22-like family protein | |||
| 15730 | YqaJ viral recombinase family protein | |||
| 15735 | M | M.Kpnu28ORF20920P (100% identity) | GATC | M.KpnSB1139ORF15735P |
| 15740 | 73 aa hypothetical protein | |||
| 23235 | HNH endonuclease | |||
| 23240 | R | Ksp4251ORF21915P (100% identity) | KpnSB1139ORF23240P | |
| 23245 | type VI secretion system tube protein Hcp | |||