Escherichia coli Z30 |
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Putative Escherichia coli Z30 RM systems
Ref: Yang,Q. et al. unpublished
REBASE ref # 33417
| Sequence length: | GenBank #: | |
| Chromosome: | 4,804,173 bp | CP066844 |
| plasmid pZ30-NDM-29: | 60,935 bp | CP066846 |
| plasmid pZ30-TEM-1B: | 127,534 bp | CP066845 |
REBASE acronym: EcoZ30
Org_num: 53947
All begin JHL13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9485 | IS3 family transposase | |||
| 9490 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoZ30ORF9490P |
| 9495 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoZ30ORF9490P |
| 9500 | YecA family protein | |||
| 9505 | cold shock domain-containing protein | |||
| 9510 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | EcoZ30ORF9490P |
| 9515 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoZ30DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 family protein | |||
| 2325 | M | M.Ecoppa2ORF6235P (100% identity) | ATGCAT | M.EcoZ30ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 8775 | recombination protein NinB | |||
| 8780 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoZ30ORF8780P |
| 8785 | protein ninD | |||
| 9230 | phosphohydrolase | |||
| 9235 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.EcoZ30DcmP |
| 9240 | V | V.Ecoppa2DcmP (100% identity) | V.EcoZ30DcmP | |
| 9245 | drug/metabolite exporter YedA | |||
| 19095 | RM | EcoPD23ORF21195P (100% identity) | EcoZ30ORF19095P | |
| 19100 | DEAD/DEAH box helicase | |||
| 20450 | phage lysis protein EssD | |||
| 20455 | M | M.Sso63633ORF22290P (100% identity) | M.EcoZ30ORF20455P | |
| 20460 | 67 aa hypothetical protein | |||
| 20490 | LexA family transcriptional regulator | |||
| 20495 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoZ30ORF20495P |
| 20500 | PerC family transcriptional regulator | |||
| plasmid pZ30-NDM-29 | ||||
| 23280 | EAL domain-containing protein | |||
| 23285 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoZ30ORF23290P |
| 23290 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.EcoZ30ORF23290P |
| 23295 | IS1 family transposase | |||
| plasmid pZ30-TEM-1B | ||||
| 23050 | 73 aa hypothetical protein | |||
| 23055 | M | M.SflN92ORF24820P (100% identity) | M.EcoZ30ORF23055P | |
| 23060 | 101 aa hypothetical protein | |||