Escherichia coli NDM2 |
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Putative Escherichia coli NDM2 RM systems
Ref: Simner,P. et al. unpublished
REBASE ref # 33390
Complete sequence: 4,745,287 bp
GenBank #: CP083886
REBASE acronym: EcoNDM2
Org_num: 53814
All begin LCE23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10390 | IS1 family transposase | |||
| 10395 | R | EcosNDM5ORF9185P (100% identity) | EcoNDM2ORF10395P | |
| 10400 | M48 family metallopeptidase | |||
| 21930 | IS3-like element ISSen4 family transposase | |||
| 21935 | R | EcotcmA3ORF16550P (100% identity) | EcoNDM2ORF21955P | |
| 21940 | DNA-protecting protein DprA | |||
| 21945 | RecQ family ATP-dependent DNA helicase | |||
| 21950 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoNDM2ORF21955P | |
| 21955 | M | M.Pre393ORF2750P (100% identity) | M.EcoNDM2ORF21955P | |
| 21960 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3225 | DUF2556 family protein | |||
| 3230 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoNDM2ORF3230P |
| 3235 | DNA-binding transcriptional regulator Fis | |||
| 4885 | BREX-1 system phosphatase PglZ type A | |||
| 4890 | RM | EcoP19598ORF21290P (100% identity) | EcoNDM2ORF4890P | |
| 4895 | BREX system P-loop protein BrxC | |||
| 10075 | phosphohydrolase | |||
| 10080 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoNDM2DcmP |
| 10085 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoNDM2DcmP |
| 10090 | drug/metabolite exporter YedA | |||
| 18585 | phage holin, lambda family | |||
| 18590 | M | M.SflSTLE1ORF5465P (100% identity) | M.EcoNDM2ORF18590P | |
| 18595 | 95 aa hypothetical protein | |||
| 20525 | HNH endonuclease | |||
| 20530 | R | SflSTLE4ORF19250P (100% identity) | EcoNDM2ORF20530P | |
| 20535 | McrC family protein | |||
| 20700 | IS21-like element IS100 family transposase | |||
| 20705 | R | Ecop10BORF20145P (100% identity) | EcoNDM2ORF20705P | |
| 20710 | sigma 54-interacting transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18425 | DinI family protein | |||
| 18430 | R | Ecop10BGmrSDP (100% identity) | EcoNDM2GmrSDP | |
| 18435 | 28 aa hypothetical protein | |||
| 20530 | HNH endonuclease | |||
| 20535 | R | SflSTLE4McrCP (100% identity) | EcoNDM2McrCP | |
| 20540 | R | SflSTLE4McrBP (30% identity) | EcoNDM2McrBP | |
| 20545 | IS1-like element IS1A family transposase | |||