Escherichia fergusonii EF31 |
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Putative Escherichia fergusonii EF31 RM systems
Ref: Chang,J. et al. unpublished
REBASE ref # 32720
| Sequence length: | GenBank #: | |
| Chromosome: | 4,479,464 bp | CP070951 |
| plasmid pTB31P1: | 184,652 bp | CP070952 |
| plasmid pTB31P2: | 124,087 bp | CP070953 |
REBASE acronym: EfeEF31
Org_num: 53974
All begin JW961_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5215 | IS1 family transposase | |||
| 5220 | R | EcoM9812ORF11290P (99% identity) | EfeEF31ORF5230P | |
| 5225 | S | S.EcoRG044ORF6130P (100% identity) | S.EfeEF31ORF5230P | |
| 5230 | M | M.EcoRG044ORF6130P (100% identity) | M.EfeEF31ORF5230P | |
| 5235 | transposase | |||
| plasmid pTB31P2 | ||||
| 22765 | IS5-like element IS903B family transposase | |||
| 22770 | R | EcoF637ORF46280P (100% identity) | EfeEF31ORF22780P | |
| 22775 | S | S.EcoF637ORF46280P (100% identity) | S.EfeEF31ORF22780P | |
| 22780 | M | M.EcoF637ORF46280P (100% identity) | M.EfeEF31ORF22780P | |
| 22785 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1195 | bifunctional isocitrate dehydrogenase | |||
| 1200 | M | M.Efe35473ORFAP (97% identity) | M.EfeEF31ORF1200P | |
| 1205 | glyoxylate bypass operon transcriptional | |||
| 5985 | serine/threonine protein phosphatase | |||
| 5990 | M | M.EcoOr019ORF7375P (99% identity) | M.EfeEF31ORF5990P | |
| 5995 | PerC family transcriptional regulator | |||
| 7785 | DUF3850 domain-containing protein | |||
| 7790 | M | M.EcoR70ORF6410P (99% identity) | GATC | M.EfeEF31ORF7790P |
| 7795 | replication endonuclease | |||
| 18075 | IS3 family transposase | |||
| 18080 | R | Efe1ORFCP (83% identity) | EfeEF31ORF18080P | |
| 18085 | integrase arm-type DNA-binding domain-containing | |||
| 18725 | DNA-binding transcriptional regulator Fis | |||
| 18730 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.EfeEF31ORF18730P |
| 18735 | DUF2556 family protein | |||
| 19245 | ribulose-phosphate 3-epimerase | |||
| 19250 | M | M.EfeTDamP (100% identity) | GATC | M.EfeEF31DamP |
| 19255 | cell division protein DamX | |||
| plasmid pTB31P1 | ||||
| 22010 | 55 aa hypothetical protein | |||
| 22015 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EfeEF31ORF22015P |
| 22020 | thermonuclease family protein | |||
| 22280 | DNA-binding protein | |||
| 22285 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EfeEF31ORF22285P |
| 22290 | 284 aa hypothetical protein | |||
| plasmid pTB31P2 | ||||
| 22535 | helix-turn-helix transcriptional regulator | |||
| 22540 | R | EcoPSS04ORF43160P (100% identity) | GCWGC | EfeEF31ORF22540P |
| 22545 | IS1 family transposase | |||
| 22630 | recombination-associated protein RdgC | |||
| 22635 | M | M.Efe44C03ORF22840P (18% identity) | M.EfeEF31ORF22635P | |
| 22640 | IS1 family transposase | |||