Vibrio tasmaniensis 1F-267 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio tasmaniensis 1F-267 RM systems
Ref: Cordero,O.X. et al. Science 337 (6099), 1228-1231 (2012)
REBASE ref # 31753
Contig set: 5,126,856 bp
GenBank #: AJZO00000000 (NZ_AJZO00000000)
REBASE acronym: Vta267
Org_num: 52681
All begin A163_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5065 | 182 aa hypothetical protein | |||
| 5070 | S | S.Vsp267ORFBP (100% identity) | S.Vta267ORF5075P | |
| 5075 | M | M.Vsp267ORFBP (100% identity) | M.Vta267ORF5075P | |
| 5080 | R | Vsp267ORFBP (98% identity) | Vta267ORF5075P | |
| 5085 | restriction endonuclease | |||
| 21275 | 870 aa hypothetical protein | |||
| 21280 | S | S.Vsp267ORFGP (100% identity) | S.Vta267ORF21285P | |
| 21285 | M | M.Vsp267ORFGP (100% identity) | M.Vta267ORF21285P | |
| 21290 | R | Vsp267ORFGP (100% identity) | Vta267ORF21285P | |
| 21295 | 421 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4275 | 787 aa hypothetical protein | |||
| 4280 | M | M.Vsp267ORFAP (96% identity) | M.Vta267ORF4280P | |
| 4285 | 126 aa hypothetical protein | |||
| 16195 | 675 aa hypothetical protein | |||
| 16200 | M | M.Vsp398DndBP (98% identity) | M.Vta267DndBP | |
| 16205 | 601 aa hypothetical protein | |||
| 12340 | aspartate aminotransferase | |||
| 12345 | M | M.Vsp267ORFDP (100% identity) | M.Vta267ORF12345P | |
| 12350 | R | VchSA10GORF14510P (19% identity) | Vta267ORF12345P | |
| 16200 | DNA sulfur modification protein DndB | |||
| 16205 | M | M.Vsp398DndCP (100% identity) | M.Vta267DndCP | |
| 16210 | DNA sulfur modification protein DndD | |||
| 16205 | 601 aa hypothetical protein | |||
| 16210 | M | M.Vgi001DndDP (96% identity) | M.Vta267DndDP | |
| 16215 | DNA sulfur modification protein DndE | |||
| 16220 | 327 aa hypothetical protein | |||
| 16225 | 426 aa hypothetical protein | |||
| 16230 | R | Vsp398DndD2P (92% identity) | Vta267DndDP | |
| 16235 | DNA phosphorothioation-dependent restriction | |||
| 16220 | 327 aa hypothetical protein | |||
| 16225 | R | Vsp398DndEP (98% identity) | Vta267DndEP | |
| 16230 | restriction endonuclease | |||
| 16230 | restriction endonuclease | |||
| 16235 | R | Vsp398DptHP (95% identity) | Vta267DptHP | |
| 16240 | DNA phosphorothioation-dependent restriction | |||
| 16235 | DNA phosphorothioation-dependent restriction | |||
| 16240 | R | Vgi001DptGP (99% identity) | Vta267DptGP | |
| 16245 | DNA phosphorothioation-dependent restriction | |||
| 16240 | DNA phosphorothioation-dependent restriction | |||
| 16245 | R | Vgi001DptFP (99% identity) | Vta267DptFP | |
| 16250 | ribonuclease H | |||
| 13535 | cell division protein DamX | |||
| 13540 | M | M.VspLGPDamP (100% identity) | GATC | M.Vta267DamP |
| 13545 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5080 | restriction endonuclease subunit R | |||
| 5085 | R | Vsp267MrrP (100% identity) | Vta267MrrP | |
| 5090 | DNA-binding protein | |||
| 21265 | GNAT family N-acetyltransferase | |||
| 21270 | R | Vsp267McrCP (100% identity) | Vta267McrCP | |
| 21275 | R | Vsp267McrBP (100% identity) | Vta267McrBP | |
| 21280 | 467 aa hypothetical protein | |||