Escherichia coli JNU |
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Putative Escherichia coli JNU RM systems
Ref: Han,H. et al. unpublished
REBASE ref # 33385
| Sequence length: | GenBank #: | |
| Chromosome: | 4,887,408 bp | CP083263 |
| plasmid p1: | 102,134 bp | CP083264 |
REBASE acronym: EcoJNU
Org_num: 53809
All begin K6T58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11880 | 128 aa hypothetical protein | |||
| 11885 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.EcoJNUORF11885P |
| 11890 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoJNUORF11885P |
| 11895 | 428 aa hypothetical protein | |||
| 15565 | DUF600 family protein | |||
| 15570 | R | Eco40SOC05ORF16400P (100% identity) | EcoJNUORF15575P | |
| 15575 | M | M.Eco8SOC05ORF4105P (100% identity) | M.EcoJNUORF15575P | |
| 15580 | S | S.Eco40SOC05ORF16400P (98% identity) | S.EcoJNUORF15575P | |
| 15585 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11445 | LexA family transcriptional regulator | |||
| 11450 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoJNUORF11450P |
| 11455 | PerC family transcriptional regulator | |||
| 11860 | sialate O-acetylesterase | |||
| 11865 | R | EcoSTEC640ORF20895P (100% identity) | EcoJNUORF11865P | |
| 11870 | AAA family ATPase | |||
| 17140 | cell division protein DamX | |||
| 17145 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJNUDamP |
| 17150 | ribulose-phosphate 3-epimerase | |||
| 17695 | DUF2556 family protein | |||
| 17700 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoJNUORF17700P |
| 17705 | DNA-binding transcriptional regulator Fis | |||
| plasmid p1 | ||||
| 23705 | 101 aa hypothetical protein | |||
| 23710 | M | M.SflN92ORF24820P (100% identity) | M.EcoJNUORF23710P | |
| 23715 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11865 | HNH endonuclease | |||
| 11870 | R | SflN101McrBP (100% identity) | EcoJNUMcrBP | |
| 11875 | R | EcohubtMcrCP (100% identity) | EcoJNUMcrCP | |
| 11880 | 128 aa hypothetical protein | |||
| 20865 | IS3-like element IS3 family transposase | |||
| 20870 | R | EspFAAGmrSDP (87% identity) | EcoJNUGmrSDP | |
| 20875 | DinI-like family protein | |||