Escherichia fergusonii 6S41-1 |
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Putative Escherichia fergusonii 6S41-1 RM systems
Ref: Liu,R. unpublished
REBASE ref # 31256
| Sequence length: | GenBank #: | |
| Chromosome: | 4,724,978 bp | CP079884 |
| plasmid p1-6S41-1: | 118,628 bp | CP079885 |
REBASE acronym: Efe65411
Org_num: 53972
All begin KYC43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17485 | GTPase family protein | |||
| 17490 | M | M.Efe38C01ORF16835P (100% identity) | M.Efe65411ORF17490P | |
| 17495 | S | S.Efe38C01ORF16835P (100% identity) | S.Efe65411ORF17490P | |
| 17500 | R | EfeC23ORF13600P (100% identity) | Efe65411ORF17490P | |
| 17505 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1230 | bifunctional isocitrate dehydrogenase | |||
| 1235 | M | M.EfeC10ORF1445P (100% identity) | CCWGG | M.Efe65411ORF1235P |
| 1240 | glyoxylate bypass operon transcriptional | |||
| 2905 | 67 aa hypothetical protein | |||
| 2910 | M | M.Ecoppa6ORF9490P (100% identity) | M.Efe65411ORF2910P | |
| 2915 | phage lysis protein EssD | |||
| 5520 | PerC family transcriptional regulator | |||
| 5525 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Efe65411ORF2870P |
| 5530 | LexA family transcriptional regulator | |||
| 7200 | flagella biosynthesis regulator Flk | |||
| 7205 | M | M.Efe38C04ORF7105P (100% identity) | M.Efe65411ORF7205P | |
| 7210 | Com family DNA-binding transcriptional | |||
| 13815 | NinE family protein | |||
| 13820 | M | M.Eco38C15ORF22385P (100% identity) | GATC | M.Efe65411ORF13820P |
| 13825 | recombination protein NinB | |||
| 19335 | DEAD/DEAH box helicase | |||
| 19340 | RM | Efe1521ORF12015P (100% identity) | Efe65411ORF19340P | |
| 19345 | DEAD/DEAH box helicase | |||
| 19375 | N-acetylneuraminic acid mutarotase | |||
| 19380 | R | Efe1521ORF12055P (100% identity) | Efe65411ORF19380P | |
| 19385 | peptidase | |||
| 19520 | IS4-like element ISVsa5 family transposase | |||
| 19525 | RM | EcoPEC0003ORF9200P (54% identity) | Efe65411ORF19525P | |
| 19530 | BREX system P-loop protein BrxC | |||
| 20270 | tyrosine-type recombinase/integrase | |||
| 20275 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe65411ORF20275P |
| 20280 | DUF2556 family protein | |||
| 20805 | ribulose-phosphate 3-epimerase | |||
| 20810 | M | M.EfeTDamP (100% identity) | GATC | M.Efe65411DamP |
| 20815 | cell division protein DamX | |||
| plasmid p1-6S41-1 | ||||
| 23320 | 103 aa hypothetical protein | |||
| 23325 | M | M.SflLIN4ORF23595P (100% identity) | M.Efe65411ORF23325P | |
| 23330 | 73 aa hypothetical protein | |||