Escherichia coli CX08 |
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Putative Escherichia coli CX08 RM systems
Ref: Yang,X. et al. unpublished
REBASE ref # 33263
Complete sequence: 4,866,875 bp
GenBank #: CP073718
REBASE acronym: EcoCX08
Org_num: 53675
All begin J6O57_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoCX08ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 3440 | DEAD/DEAH box helicase | |||
| 3445 | RM | Sma1978ORFHP (99% identity) | CTTGAC | EcoCX08ORF3445P |
| 3450 | IS66 family transposase | |||
| 4240 | BREX-1 system phosphatase PglZ type A | |||
| 4245 | RM | EcoS1ORF18750P (100% identity) | EcoCX08ORF4245P | |
| 4250 | BREX system P-loop protein BrxC | |||
| 7360 | recombination protein NinB | |||
| 7365 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoCX08ORF7365P |
| 7370 | NinE family protein | |||
| 9485 | phosphohydrolase | |||
| 9490 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoCX08DcmP |
| 9495 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoCX08DcmP |
| 9500 | drug/metabolite exporter YedA | |||
| 15980 | replication endonuclease | |||
| 15985 | M | M.EcoPE15ORF23185P (100% identity) | GATC | M.EcoCX08ORF15985P |
| 15990 | TraR/DksA family transcriptional regulator | |||
| 21825 | phage holin, lambda family | |||
| 21830 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoCX08ORF21830P | |
| 21835 | 67 aa hypothetical protein | |||
| 22830 | DUF4406 domain-containing protein | |||
| 22835 | M | M.EcoNIH5ORF13280P (100% identity) | M.EcoCX08ORF22835P | |
| 22840 | 3-5 exoribonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3260 | inovirus Gp2 family protein | |||
| 3265 | R | SenLASSORF19350P (100% identity) | EcoCX08ORF3270P | |
| 3270 | M | M.Sen5006ORF16245P (100% identity) | M.EcoCX08ORF3270P | |
| 3275 | Cd(II)/Pb(II)-responsive transcriptional | |||