Raoultella planticola JBIWA001 |
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Putative Raoultella planticola JBIWA001 RM systems
Ref: Gomi,R. unpublished
REBASE ref # 32053
| Sequence length: | GenBank #: | |
| Chromosome: | 5,626,881 bp | CP074182 |
| plasmid pJBIWA001_1: | 136,413 bp | CP074183 |
| plasmid pJBIWA001_2: | 129,579 bp | CP074184 |
| plasmid pJBIWA001_3: | 110,557 bp | CP074185 |
| plasmid pJBIWA001_5: | 32,930 bp | CP074187 |
| plasmid pJBIWA001_8: | 4,906 bp | CP074190 |
REBASE acronym: RplWA001
Org_num: 55070
All begin KGP19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24570 | restriction system-associated AAA family ATPase | |||
| 24575 | S | S.Kox493ORF27300P (100% identity) | GAGNNNNNNNTGGC | S.RplWA001ORF24580P |
| 24580 | M | M.Kox493ORF27300P (100% identity) | GAGNNNNNNNTGGC | M.RplWA001ORF24580P |
| 24585 | molybdopterin-guanine dinucleotide biosynthesis | |||
| plasmid pJBIWA001_1 | ||||
| 26960 | YkgJ family cysteine cluster protein | |||
| 26965 | M | M.KpnNDM1ORF21860P (100% identity) | M.RplWA001ORF26965P | |
| 26970 | S | S.KpnNDM1ORF21860P (100% identity) | S.RplWA001ORF26965P | |
| 26975 | R | KpnNDM1ORF21860P (100% identity) | RplWA001ORF26965P | |
| 26980 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | cell division protein DamX | |||
| 1865 | M | M.RplS62DamP (100% identity) | GATC | M.RplWA001DamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 6275 | 63 aa hypothetical protein | |||
| 6280 | M | M.EcoE47ORF6440P (88% identity) | M.RplWA001ORF6280P | |
| 6285 | PerC family transcriptional regulator | |||
| 6330 | 68 aa hypothetical protein | |||
| 6335 | M | M.Kpn9644ORF3352P (91% identity) | M.RplWA001ORF6335P | |
| 6340 | DNA replication domain protein | |||
| 6350 | 258 aa hypothetical protein | |||
| 6355 | M | M.Rpl9528ORF4689P (98% identity) | M.RplWA001ORF6355P | |
| 6360 | 87 aa hypothetical protein | |||
| 9190 | phosphohydrolase | |||
| 9195 | M | M.RplS62DcmP (100% identity) | M.RplWA001DcmP | |
| 9200 | V | V.RplS62DcmP (100% identity) | V.RplWA001DcmP | |
| 9205 | drug/metabolite exporter YedA | |||
| 9385 | 158 aa hypothetical protein | |||
| 9390 | M | M1.Rpl10263ORF590P (92% identity) | M.RplWA001ORF9390P | |
| 9395 | DNA cytosine methyltransferase | |||
| 9390 | class I SAM-dependent methyltransferase | |||
| 9395 | M | M2.Rpl10263ORF590P (91% identity) | M.RplWA001ORF9395P | |
| 9400 | 112 aa hypothetical protein | |||
| 12715 | DUF968 domain-containing protein | |||
| 12720 | M | M1.KpnH165ORFBP (100% identity) | M.RplWA001ORF12720P | |
| 12725 | DNA cytosine methyltransferase | |||
| 12720 | phage N-6-adenine-methyltransferase | |||
| 12725 | M | M2.KpnH165ORFBP (100% identity) | M.RplWA001ORF12725P | |
| 12730 | YlcG family protein | |||
| 16550 | 64 aa hypothetical protein | |||
| 16555 | M | M.RplHH15ORF16610P (99% identity) | M.RplWA001ORF16555P | |
| 16560 | 3-5 exoribonuclease | |||
| plasmid pJBIWA001_1 | ||||
| 27030 | 67 aa hypothetical protein | |||
| 27035 | M | M.SmaBWH35ORF25885P (100% identity) | M.RplWA001ORF27035P | |
| 27040 | 73 aa hypothetical protein | |||
| plasmid pJBIWA001_2 | ||||
| 27825 | 64 aa hypothetical protein | |||
| 27830 | M | M.RorFF15ORF27080P (100% identity) | M.RplWA001ORF27830P | |
| 27835 | 73 aa hypothetical protein | |||
| plasmid pJBIWA001_3 | ||||
| 28765 | 73 aa hypothetical protein | |||
| 28770 | M | M.SmaBWH35ORF25885P (100% identity) | M.RplWA001ORF28770P | |
| 28775 | 76 aa hypothetical protein | |||
| plasmid pJBIWA001_5 | ||||
| 29585 | recombinase family protein | |||
| 29590 | M | M.KspRE03ORF30260P (100% identity) | CCCGGG | M.RplWA001ORF29590P |
| 29595 | R | R2.Ksp52244ORF30170P (100% identity) | CCCGGG | RplWA001ORF29590P |
| 29600 | AAA family ATPase | |||
| plasmid pJBIWA001_8 | ||||
| 29745 | plasmid mobilization relaxosome protein MobC | |||
| 29750 | M | M.KpnN68ORF26425P (99% identity) | M.RplWA001ORF29750P | |