Polaribacter litorisediminis OITF-11 |
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Putative Polaribacter litorisediminis OITF-11 RM systems
Ref: Park,S. et al. Int J Syst Evol Microbiol 67 (6), 2036-2042 (2017)
REBASE ref # 33668
Complete sequence: 4,339,639 bp
GenBank #: CP082966
REBASE acronym: Pli11
Org_num: 54860
All begin K8354_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7245 | 128 aa hypothetical protein | |||
| 7250 | S | S.BspMNPM8ORF1505P (39% identity) | S.Pli11ORF7255P | |
| 7255 | M | M.PspSA412ORF16480P (93% identity) | M.Pli11ORF7255P | |
| 7260 | virulence RhuM family protein | |||
| 7265 | R | PspSA412ORF16480P (92% identity) | Pli11ORF7255P | |
| 7270 | carboxypeptidase-like regulatory | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5210 | 292 aa hypothetical protein | |||
| 5215 | RM | MyuLY01ORF495P (59% identity) | Pli11ORF5215P | |
| 5220 | peptidylprolyl isomerase | |||
| 6065 | 301 aa hypothetical protein | |||
| 6070 | RM | PspALD11ORF5500P (77% identity) | Pli11ORF6070P | |
| 6075 | DNA-binding protein | |||
| 10945 | methylmalonyl-CoA mutase family protein | |||
| 10950 | RM | WspHL857ORFAP (64% identity) | Pli11ORF10950P | |
| 10955 | FKBP-type peptidyl-prolyl cis-trans isomerase | |||
| 11895 | bacteriophage abortive infection AbiH family | |||
| 11900 | RM | SmiF1ORF8740P (66% identity) | Pli11ORF11900P | |
| 11905 | helix-turn-helix domain-containing protein | |||
| 13535 | flagellar motor protein MotB | |||
| 13540 | M | M.PspF4M1ORF10725P (93% identity) | M.Pli11ORF13540P | |
| 13545 | 110 aa hypothetical protein | |||
| 13550 | R | PspF4M1ORF10725P (90% identity) | Pli11ORF13540P | |
| 13555 | Na(+)-translocating NADH-quinone reductase | |||
| 16340 | 307 aa hypothetical protein | |||
| 16345 | C | C.UbaSCBORF14710P (89% identity) | C.Pli11ORF16350P | |
| 16350 | M | M.FspHMM57ORF14510P (71% identity) | M.Pli11ORF16350P | |
| 16355 | 62 aa hypothetical protein | |||
| 16360 | R | FspHMM57ORF14510P (80% identity) | Pli11ORF16350P | |
| 16365 | 68 aa hypothetical protein | |||
| 16845 | Uma2 family endonuclease | |||
| 16850 | RM | PspSA412ORF8255P (87% identity) | Pli11ORF16850P | |
| 16855 | LD-carboxypeptidase | |||
| 16900 | DUF6079 family protein | |||
| 16905 | M | M.SspC3ORFEP (46% identity) | M.Pli11SspCP | |
| 16910 | PglZ domain-containing protein | |||
| 17270 | DEAD/DEAH box helicase | |||
| 17275 | RM | Ssp11388ORF1752P (46% identity) | Pli11ORF17275P | |
| 17280 | 50S ribosome-binding GTPase | |||