Salmonella enterica subsp. enterica serovar Hadar CVM N18S1943 |
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Putative Salmonella enterica subsp. enterica serovar Hadar CVM N18S1943 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,764,991 bp | CP082540 |
| plasmid pN18S1943-1: | 125,299 bp | CP082542 |
REBASE acronym: SenS1943
Org_num: 55234
All begin FQE61_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2055 | cell division protein DamX | |||
| 2060 | M | M.StyTDamP (100% identity) | GATC | M.SenS1943DamP |
| 2065 | ribulose-phosphate 3-epimerase | |||
| 2545 | DUF2556 family protein | |||
| 2550 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenS1943ORF2550P |
| 2555 | DNA-binding transcriptional regulator Fis | |||
| 9140 | phosphohydrolase | |||
| 9145 | M | M.SenWC81DcmP (100% identity) | CCWGG | M.SenS1943DcmP |
| 9150 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS1943DcmP |
| 9155 | drug/metabolite exporter YedA | |||
| 20005 | YebC/PmpR family DNA-binding transcriptional | |||
| 20010 | R | SenT075BORF19820P (100% identity) | SenS1943ORF20010P | |
| 20015 | IS3 family transposase | |||
| 20030 | conjugal transfer protein TraD | |||
| 20035 | R | SenT075BORF19850P (100% identity) | GCTNAGC | SenS1943ORF20040P |
| 20040 | M | M.SenT075BORF19850P (100% identity) | GCTNAGC | M.SenS1943ORF20040P |
| 20045 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pN18S1943-1 | ||||
| 23495 | IS1 family transposase | |||
| 23500 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenS1943ORF23500P |
| 23505 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenS1943ORF23500P |
| 23510 | IS6-like element IS26 family transposase | |||
| 23665 | 104 aa hypothetical protein | |||
| 23670 | M | M.SspPIBORF23080P (100% identity) | M.SenS1943ORF23670P | |
| 23675 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17605 | small effector SsaA | |||
| 17610 | R | SenT075BORF17425P (100% identity) | CAGAG | SenS1943ORF17615P |
| 17615 | M | M.SenT075BORF17425P (100% identity) | CAGAG | M.SenS1943ORF17615P |
| 17620 | MFS transporter | |||