Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N18S0993 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N18S0993 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,817,368 bp | CP082571 |
| plasmid pN18S0993-1: | 235,635 bp | CP082572 |
| plasmid pN18S0993-2: | 93,838 bp | CP082573 |
REBASE acronym: SenS0993
Org_num: 55169
All begin F9188_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20090 | restriction endonuclease | |||
| 20095 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS0993ORF20100P |
| 20100 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenS0993ORF20100P |
| 20105 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS0993ORF20100P |
| 20110 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2000 | cell division protein DamX | |||
| 2005 | M | M.StyTDamP (100% identity) | GATC | M.SenS0993DamP |
| 2010 | ribulose-phosphate 3-epimerase | |||
| 9510 | PerC family transcriptional regulator | |||
| 9515 | M | M.StyUK1V (100% identity) | GATC | M.SenS0993ORF9515P |
| 9520 | RusA family crossover junction | |||
| 9750 | phosphohydrolase | |||
| 9755 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS0993DcmP |
| 9760 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS0993DcmP |
| 9765 | drug/metabolite exporter YedA | |||
| 20250 | BREX system P-loop protein BrxC | |||
| 20255 | RM | StyUK1IV (100% identity) | GATCAG | SenS0993ORF20255P |
| 20260 | AAA family ATPase | |||
| plasmid pN18S0993-1 | ||||
| 23440 | DNA-binding protein | |||
| 23445 | M | M.Ype21801ORF197P (100% identity) | M.SenS0993ORF23445P | |
| 23450 | 273 aa hypothetical protein | |||
| 24055 | 56 aa hypothetical protein | |||
| 24060 | M | M.Sens770ORF21675P (100% identity) | M.SenS0993ORF24060P | |
| 24065 | thermonuclease family protein | |||
| plasmid pN18S0993-2 | ||||
| 24810 | 118 aa hypothetical protein | |||
| 24815 | M | M.StyUK1ORFAP (100% identity) | M.SenS0993ORF24815P | |
| 24820 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17905 | small effector SsaA | |||
| 17910 | R | SenSW37ORF16990P (100% identity) | CAGAG | SenS0993ORF17915P |
| 17915 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS0993ORF17915P |
| 17920 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20085 | BrnT family toxin | |||
| 20090 | R | StyUK1MrrP (100% identity) | SenS0993MrrP | |
| 20095 | type I restriction-modification system | |||