Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N18S0173 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N18S0173 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33765
Complete sequence: 5,073,615 bp
GenBank #: CP082696
REBASE acronym: SenS0173
Org_num: 55167
All begin F9138_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2005 | cell division protein DamX | |||
| 2010 | M | M.StyTDamP (100% identity) | GATC | M.SenS0173DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2500 | DUF2556 family protein | |||
| 2505 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS0173ORF2505P |
| 2510 | DNA-binding transcriptional regulator Fis | |||
| 3420 | DUF2732 domain-containing protein | |||
| 3425 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenS0173ORF3425P |
| 3430 | replication endonuclease | |||
| 5800 | IS6-like element IS26 family transposase | |||
| 5805 | M | M.StyCORF187P (49% identity) | M.SenS0173ORF5805P | |
| 5810 | thermonuclease family protein | |||
| 6435 | ead/Ea22-like family protein | |||
| 6440 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenS0173ORF6440P |
| 6445 | 92 aa hypothetical protein | |||
| 9750 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenS0173ORF9755P | |
| 9760 | RusA family crossover junction | |||
| 10000 | phosphohydrolase | |||
| 10005 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS0173DcmP |
| 10010 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS0173DcmP |
| 10015 | drug/metabolite exporter YedA | |||
| 20900 | BREX system P-loop protein BrxC | |||
| 20905 | RM | StyUK1IV (100% identity) | GATCAG | SenS0173ORF20905P |
| 20910 | AAA family ATPase | |||
| 22820 | LexA family transcriptional regulator | |||
| 22825 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenS0173ORF22825P |
| 22830 | PerC family transcriptional regulator | |||
| 23985 | 58 aa hypothetical protein | |||
| 23990 | M | M.SenS710ORF16210P (100% identity) | TGGCCA | M.SenS0173ORF23990P |
| 23995 | 499 aa hypothetical protein | |||
| 23990 | DNA adenine methylase | |||
| 23995 | R | SenS710ORF16210P (100% identity) | TGGCCA | SenS0173ORF23995P |
| 24000 | DinI family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18110 | small effector SsaA | |||
| 18115 | R | StyUK1IP (99% identity) | CAGAG | SenS0173ORF18120P |
| 18120 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS0173ORF18120P |
| 18125 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20735 | BrnT family toxin | |||
| 20740 | R | StyUK1MrrP (100% identity) | SenS0173MrrP | |
| 20745 | type I restriction-modification system | |||