Salmonella enterica subsp. enterica serovar Derby CVM N17S1441 |
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Putative Salmonella enterica subsp. enterica serovar Derby CVM N17S1441 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,872,905 bp | CP082627 |
| plasmid pN17S1441: | 85,883 bp | CP082628 |
REBASE acronym: SenS1441
Org_num: 55196
All begin D7H03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19495 | 322 aa hypothetical protein | |||
| 19500 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | SenS1441ORF19505P |
| 19505 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.SenS1441ORF19505P |
| 19510 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.SenS1441ORF19505P |
| 19515 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1720 | cell division protein DamX | |||
| 1725 | M | M.StyTDamP (100% identity) | GATC | M.SenS1441DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 5390 | PerC family transcriptional regulator | |||
| ??? | M | M.SenS707ORF21285P (99% identity) | GATC | M.SenS1441ORF5395P |
| 5400 | RusA family crossover junction | |||
| 6310 | recombinase family protein | |||
| 6315 | M | M.Sen8646ORF16620P (100% identity) | CTGCAG | M.SenS1441ORF6315P |
| 6320 | R | Sen8646ORF16620P (100% identity) | CTGCAG | SenS1441ORF6315P |
| 6325 | 134 aa hypothetical protein | |||
| 13610 | drug/metabolite exporter YedA | |||
| 13615 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS1441DcmP |
| 13620 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.SenS1441DcmP |
| 13625 | phosphohydrolase | |||
| 17360 | phage holin, lambda family | |||
| 17365 | M | M.SensSZL38ORF10585P (100% identity) | M.SenS1441ORF17365P | |
| 17370 | 92 aa hypothetical protein | |||
| 17395 | LexA family transcriptional regulator | |||
| 17400 | M | M.SflN101ORF11410P (100% identity) | GATC | M.SenS1441ORF21265P |
| 17405 | PerC family transcriptional regulator | |||
| 19640 | YebC/PmpR family DNA-binding transcriptional | |||
| 19645 | R | SensTJX21ORF12025P (100% identity) | SenS1441ORF19645P | |
| 19650 | fosfomycin resistance glutathione transferase | |||
| 19670 | RM | SensTJX21ORF12050P (100% identity) | SenS1441ORF19670P | |
| 19675 | DEAD/DEAH box helicase | |||
| 23375 | recombinase family protein | |||
| 23380 | M | M.SspW3ORF4074P (100% identity) | CTGCAG | M.SenS1441ORF23380P |
| 23385 | R | SkhJW44ORF21540P (100% identity) | CTGCAG | SenS1441ORF23380P |
| 23390 | 214 aa hypothetical protein | |||
| plasmid pN17S1441 | ||||
| 23820 | 73 aa hypothetical protein | |||
| 23825 | M | M.SspPIBORF23080P (100% identity) | M.SenS1441ORF23825P | |
| 23830 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17005 | small effector SsaA | |||
| 17010 | R | StyUK1IP (99% identity) | CAGAG | SenS1441ORF17015P |
| 17015 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.SenS1441ORF17015P |
| 17020 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19675 | DEAD/DEAH box helicase | |||
| 19680 | R | SensTJX21ORF12060P (100% identity) | SenS1441ORF19680P | |
| 19685 | 104 aa hypothetical protein | |||