Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N17S380 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- CVM N17S380 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33765
| Sequence length: | GenBank #: | |
| Chromosome: | 4,919,561 bp | CP082706 |
| plasmid pN17S380-1: | 121,158 bp | CP082707 |
REBASE acronym: SenS380
Org_num: 55166
All begin D7E94_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenS380DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS380ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 domain-containing protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.SenS380ORF3235P |
| 3240 | replication endonuclease | |||
| 5610 | IS6-like element IS26 family transposase | |||
| 5615 | M | M.StyCORF187P (49% identity) | M.SenS380ORF5615P | |
| 5620 | thermonuclease family protein | |||
| 6245 | ead/Ea22-like family protein | |||
| 6250 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenS380ORF6250P |
| 6255 | 92 aa hypothetical protein | |||
| 9560 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenS380ORF9565P | |
| 9570 | RusA family crossover junction | |||
| 9810 | phosphohydrolase | |||
| 9815 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS380DcmP |
| 9820 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS380DcmP |
| 9825 | drug/metabolite exporter YedA | |||
| 20380 | BREX system P-loop protein BrxC | |||
| 20385 | RM | StyUK1IV (100% identity) | GATCAG | SenS380ORF20385P |
| 20390 | AAA family ATPase | |||
| 21870 | LexA family transcriptional regulator | |||
| 21875 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenS380ORF21875P |
| 21880 | PerC family transcriptional regulator | |||
| plasmid pN17S380-1 | ||||
| 24440 | 103 aa hypothetical protein | |||
| 24445 | M | M.SenS1602ORF22935P (100% identity) | M.SenS380ORF24445P | |
| 24450 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17925 | small effector SsaA | |||
| 17930 | R | StyUK1IP (99% identity) | CAGAG | SenS380ORF17935P |
| 17935 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS380ORF17935P |
| 17940 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20215 | BrnT family toxin | |||
| 20220 | R | StyUK1MrrP (100% identity) | SenS380MrrP | |
| 20225 | type I restriction-modification system | |||