Salmonella enterica subsp. enterica serovar Derby FSIS1609398 |
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Putative Salmonella enterica subsp. enterica serovar Derby FSIS1609398 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,903,909 bp | CP082426 |
| plasmid pF18S029-1: | 235,922 bp | CP082427 |
| plasmid pF18S029-2: | 158,456 bp | CP082428 |
REBASE acronym: Sen9398
Org_num: 55198
All begin BZF24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19610 | IS4-like element ISVsa5 family transposase | |||
| 19615 | S | S.SenSL01ORF20970P (61% identity) | S.Sen9398ORF19620P | |
| 19620 | M | M.SensTJX21ORF11885P (100% identity) | M.Sen9398ORF19620P | |
| 19625 | R | SensTJX21ORF11885P (100% identity) | Sen9398ORF19620P | |
| 19630 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1720 | cell division protein DamX | |||
| 1725 | M | M.StyTDamP (100% identity) | GATC | M.Sen9398DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 5630 | DUF4060 family protein | |||
| 5635 | M | M.Sens24152ORF5710P (100% identity) | GATC | M.Sen9398ORF5635P |
| 5640 | YqaJ viral recombinase family protein | |||
| 9775 | PerC family transcriptional regulator | |||
| 9780 | M | M.SenS709ORF19085P (100% identity) | M.Sen9398ORF9780P | |
| 9785 | RusA family crossover junction | |||
| 13920 | drug/metabolite exporter YedA | |||
| 13925 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen9398DcmP |
| 13930 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.Sen9398DcmP |
| 13935 | phosphohydrolase | |||
| 17695 | phage holin, lambda family | |||
| 17700 | M | M.SensSZL38ORF10585P (100% identity) | M.Sen9398ORF17700P | |
| 17705 | 92 aa hypothetical protein | |||
| 17730 | LexA family transcriptional regulator | |||
| 17735 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Sen9398ORF21625P |
| 17740 | PerC family transcriptional regulator | |||
| 20000 | YebC/PmpR family DNA-binding transcriptional | |||
| 20005 | R | SensTJX21ORF12025P (100% identity) | Sen9398ORF20005P | |
| 20010 | fosfomycin resistance glutathione transferase | |||
| 20030 | RM | SensTJX21ORF12050P (100% identity) | Sen9398ORF20030P | |
| 20035 | DEAD/DEAH box helicase | |||
| plasmid pF18S029-1 | ||||
| 24345 | 55 aa hypothetical protein | |||
| 24350 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen9398ORF24350P |
| 24355 | thermonuclease family protein | |||
| 24750 | 48 aa hypothetical protein | |||
| 24755 | M | M.YpsF1ORFBP (100% identity) | M.Sen9398ORF24755P | |
| 24760 | 202 aa hypothetical protein | |||
| 24865 | DNA-binding protein | |||
| 24870 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen9398ORF24870P |
| 24875 | 284 aa hypothetical protein | |||
| plasmid pF18S029-2 | ||||
| 25065 | 143 aa hypothetical protein | |||
| 25070 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sen9398ORF25070P |
| 25075 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17340 | small effector SsaA | |||
| 17345 | R | StyUK1IP (99% identity) | CAGAG | Sen9398ORF17350P |
| 17350 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.Sen9398ORF17350P |
| 17355 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20035 | DEAD/DEAH box helicase | |||
| 20040 | R | SensTJX21ORF12060P (100% identity) | Sen9398ORF20040P | |
| 20045 | 104 aa hypothetical protein | |||