Salmonella enterica subsp. enterica serovar Heidelberg FSIS11704575 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Heidelberg FSIS11704575 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Complete sequence: 4,841,713 bp
GenBank #: CP082415
REBASE acronym: Sen4575
Org_num: 55240
All begin CT541_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20225 | restriction endonuclease | |||
| 20230 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4575ORF20235P |
| 20235 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen4575ORF20235P |
| 20240 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4575ORF20235P |
| 20245 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1950 | cell division protein DamX | |||
| 1955 | M | M.StyTDamP (100% identity) | GATC | M.Sen4575DamP |
| 1960 | ribulose-phosphate 3-epimerase | |||
| 9120 | phosphohydrolase | |||
| 9125 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen4575DcmP |
| 9130 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen4575DcmP |
| 9135 | drug/metabolite exporter YedA | |||
| 14190 | YqaJ viral recombinase family protein | |||
| 14195 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen4575ORF14195P |
| 14200 | DUF4060 family protein | |||
| 20365 | YebC/PmpR family DNA-binding transcriptional | |||
| 20370 | R | Sens12373ORF19550P (100% identity) | Sen4575ORF20370P | |
| 20375 | fosfomycin resistance glutathione transferase | |||
| 20395 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen4575ORF20395P |
| 20400 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17275 | small effector SsaA | |||
| 17280 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen4575ORF17285P |
| 17285 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen4575ORF17285P |
| 17290 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20220 | BrnT family toxin | |||
| 20225 | R | StyUK1MrrP (100% identity) | Sen4575MrrP | |
| 20230 | type I restriction-modification system | |||