Salmonella enterica subsp. enterica serovar Hadar FSIS11705858 |
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Putative Salmonella enterica subsp. enterica serovar Hadar FSIS11705858 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
Complete sequence: 4,831,547 bp
GenBank #: CP082396
REBASE acronym: Sen5858
Org_num: 55236
All begin CW209_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20090 | restriction endonuclease | |||
| 20095 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | Sen5858ORF20100P |
| 20100 | M | M.SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | M.Sen5858ORF20100P |
| 20105 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen5858ORF20100P |
| 20110 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.Sen5858DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 5450 | TraR/DksA family transcriptional regulator | |||
| 5455 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.Sen5858ORF5455P |
| 5460 | replication endonuclease | |||
| 5470 | 62 aa hypothetical protein | |||
| 5475 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen5858ORF5475P |
| 5480 | R | SenS16ORF16875P (100% identity) | CGGCCG | Sen5858ORF5475P |
| 5485 | phage portal protein | |||
| 6295 | tyrosine-type recombinase/integrase | |||
| 6300 | M | M.Sen64276ORF6490P (100% identity) | M.Sen5858ORF6300P | |
| 6305 | DUF1317 domain-containing protein | |||
| 6355 | 77 aa hypothetical protein | |||
| 6360 | M | M.SenC1765ORF6750P (100% identity) | GATC | M.Sen5858ORF6360P |
| 6365 | Pyocin large subunit | |||
| 9165 | phosphohydrolase | |||
| 9170 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen5858DcmP |
| 9175 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen5858DcmP |
| 9180 | drug/metabolite exporter YedA | |||
| 13310 | RusA family crossover junction | |||
| 13315 | M | M.SenS16ORF9325P (100% identity) | GATC | M.Sen5858ORF13315P |
| 13320 | PerC family transcriptional regulator | |||
| 13375 | ATP-binding protein | |||
| 13380 | M | M.SenSH7ORF6615P (100% identity) | M.Sen5858ORF13380P | |
| 13385 | Eaa protein | |||
| 14510 | DUF550 domain-containing protein | |||
| 14515 | M | M.Sen46265ORF8810P (100% identity) | M.Sen5858ORF14515P | |
| 14520 | ead/Ea22-like family protein | |||
| 20230 | YebC/PmpR family DNA-binding transcriptional | |||
| 20235 | R | Sen76166ORF19310P (100% identity) | Sen5858ORF20235P | |
| 20240 | sce7725 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17885 | small effector SsaA | |||
| 17890 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen5858ORF17895P |
| 17895 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen5858ORF17895P |
| 17900 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20085 | BrnT family toxin | |||
| 20090 | R | SenNCTR462MrrP (100% identity) | Sen5858MrrP | |
| 20095 | type I restriction-modification system | |||