Salmonella enterica subsp. enterica serovar Heidelberg FSIS1606640 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg FSIS1606640 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 33764
| Sequence length: | GenBank #: | |
| Chromosome: | 4,985,524 bp | CP082503 |
| plasmid pF18S007-1: | 98,997 bp | CP082504 |
REBASE acronym: Sen6640
Org_num: 55242
All begin A8O50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2680 | IS66 family transposase | |||
| 2685 | R | EmaC12ORF18910P (99% identity) | GAACNNNNNTGC | Sen6640ORF2690P |
| 2690 | M | M.EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | M.Sen6640ORF2690P |
| 2695 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Sen6640ORF2690P |
| 2700 | transposase domain-containing protein | |||
| 4120 | endoribonuclease SymE | |||
| 4125 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen6640ORF4130P |
| 4130 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen6640ORF4130P |
| 4135 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen6640ORF4130P |
| 4140 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3965 | DEAD/DEAH box helicase | |||
| 3970 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen6640ORF3970P |
| 3990 | fosfomycin resistance glutathione transferase | |||
| 3995 | R | Sens12373ORF19550P (100% identity) | Sen6640ORF3995P | |
| 4000 | YebC/PmpR family DNA-binding transcriptional | |||
| 9780 | DUF4060 family protein | |||
| 9785 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen6640ORF9785P |
| 9790 | YqaJ viral recombinase family protein | |||
| 14845 | drug/metabolite exporter YedA | |||
| 14850 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen6640DcmP |
| 14855 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen6640DcmP |
| 14860 | phosphohydrolase | |||
| 22185 | ribulose-phosphate 3-epimerase | |||
| 22190 | M | M.StyTDamP (100% identity) | GATC | M.Sen6640DamP |
| 22195 | cell division protein DamX | |||
| plasmid pF18S007-1 | ||||
| 24435 | 103 aa hypothetical protein | |||
| 24440 | M | M.StyR64ORFAP (100% identity) | M.Sen6640ORF24440P | |
| 24445 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6695 | MFS transporter | |||
| 6700 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen6640ORF6700P |
| 6705 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen6640ORF6700P |
| 6710 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4135 | type I restriction-modification system | |||
| 4140 | R | StyUK1MrrP (100% identity) | Sen6640MrrP | |
| 4145 | BrnT family toxin | |||