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Putative Raoultella planticola SCLZS62 RM systems
Ref: Zhang,L. and Li,Y. unpublished
REBASE ref # 33123
Sequence length: | GenBank #: | |
Chromosome: | 5,490,846 bp | CP082168 |
plasmid p2_SCLZS62: | 110,781 bp | CP082170 |
plasmid p3_SCLZS62: | 116,031 bp | CP082171 |
plasmid p4_SCLZS62: | 125,664 bp | CP082172 |
plasmid p5_SCLZS62: | 173,509 bp | CP082173 |
plasmid p6_SCLZS62: | 266,366 bp | CP082174 |
plasmid p7_SCLZS62: | 334,207 bp | CP082175 |
plasmid p9_SCLZS62: | 74,646 bp | CP082177 |
REBASE acronym: RplS62
Org_num: 55071
All begin K6028_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
22505 | restriction endonuclease | |||
22510 | M | M.Rpl52256ORF44110P (96% identity) | M.RplS62ORF22510P | |
22515 | S | S.Rel01CORF22830P (60% identity) | S.RplS62ORF22510P | |
22520 | type I restriction endonuclease | |||
??? | R | RorWM1ORF22825P (80% identity) | RplS62ORF22510P | |
22535 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1995 | cell division protein DamX | |||
2000 | M | M.RplWA001DamP (100% identity) | GATC | M.RplS62DamP |
2005 | ribulose-phosphate 3-epimerase | |||
9295 | phosphohydrolase | |||
9300 | M | M.RplWA001DcmP (100% identity) | M.RplS62DcmP | |
9305 | V | V.RplWA001DcmP (100% identity) | V.RplS62DcmP | |
9310 | drug/metabolite exporter YedA | |||
plasmid p2_SCLZS62 | ||||
26005 | SOS response-associated peptidase family | |||
26010 | M | M.YpeZORF72P (100% identity) | M.RplS62ORF26010P | |
26015 | 73 aa hypothetical protein | |||
plasmid p3_SCLZS62 | ||||
27070 | 280 aa hypothetical protein | |||
27075 | M | M.SphSSU5ORF88P (96% identity) | GATC | M.RplS62ORF27075P |
27080 | 76 aa hypothetical protein | |||
plasmid p4_SCLZS62 | ||||
27685 | 76 aa hypothetical protein | |||
27690 | M | M.SmaBWH35ORF25885P (100% identity) | M.RplS62ORF27690P | |
27695 | 73 aa hypothetical protein | |||
plasmid p5_SCLZS62 | ||||
28030 | 120 aa hypothetical protein | |||
28035 | M | M.Vch11614ORFCP (100% identity) | M.RplS62ORF28035P | |
28040 | 149 aa hypothetical protein | |||
28370 | 100 aa hypothetical protein | |||
28375 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.RplS62ORF28375P |
28380 | 143 aa hypothetical protein | |||
plasmid p6_SCLZS62 | ||||
30215 | 76 aa hypothetical protein | |||
30220 | M | M.Sen3039ORF24445P (100% identity) | GATC | M.RplS62ORF30220P |
30225 | DNA polymerase III subunit beta | |||
plasmid p7_SCLZS62 | ||||
30835 | 144 aa hypothetical protein | |||
30840 | M | M.Rpl80511ORFCP (100% identity) | CCWGG | M.RplS62ORF30840P |
30845 | R | Rpl80511ORFCP (100% identity) | CCWGG | RplS62ORF30840P |
30850 | 82 aa hypothetical protein | |||
30935 | 81 aa hypothetical protein | |||
30940 | M | M.RplNDM1ORF92P (97% identity) | M.RplS62ORF30940P | |
30945 | 1126 aa hypothetical protein | |||
plasmid p9_SCLZS62 | ||||
32495 | ABC transporter | |||
32500 | R | Ksp4251ORF25075P (100% identity) | RplS62ORF32505P | |
32505 | M | M.Rpl80511ORFGP (100% identity) | M.RplS62ORF32505P | |
32510 | recombinase family protein | |||
32875 | 73 aa hypothetical protein | |||
32880 | M | M.Kva19ORF3555P (100% identity) | M.RplS62ORF32880P | |
32885 | 76 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
22495 | 146 aa hypothetical protein | |||
22500 | R | Ror9155McrBP (99% identity) | RplS62McrBP | |
22505 | R | Rpl52256McrCP (99% identity) | RplS62McrCP | |
22510 | type I restriction-modification system subunit |