Campylobacter coli isolate 2 |
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Putative Campylobacter coli isolate 2 RM systems
Ref: Astvaldsson,A. and Skarin,J. unpublished
REBASE ref # 33033
Complete sequence: 1,707,349 bp
GenBank #: OU532556
REBASE acronym: Cco2
Org_num: 51978
All begin CC177238_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 225 | alpha/beta hydrolase | |||
| 226 | M | M.Ccos1875ORFAP (100% identity) | M.Cco2ORF226P | |
| 227 | Fic family protein | |||
| 228 | S | S.Csp639ORFDP (56% identity) | S.Cco2ORF226P | |
| 229 | 150 aa hypothetical protein | |||
| 230 | DUF4065 domain-containing protein | |||
| 231 | R | Cco417ORFCP (99% identity) | Cco2ORF226P | |
| 232 | NAD(P)-dependent alcohol dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 33 | 929 aa hypothetical protein | |||
| 34 | RM | Cco143ORF41P (99% identity) | GAAGAA | Cco2ORF34P |
| 35 | 162 aa hypothetical protein | |||
| 736 | endonuclease MutS2 | |||
| 737 | RM | Cco962ORFGP (99% identity) | CAYNNNNNCTC | Cco2ORF737P |
| 738 | NAD-dependent deacetylase | |||
| 740 | succinyl-diaminopimelate desuccinylase | |||
| 741 | RM | CcoYH503ORF5160P (99% identity) | GGGTDA | Cco2ORF741P |
| 742 | sulfur carrier protein ThiS | |||
| 1460 | 95 aa hypothetical protein | |||
| 1461 | M | M.CcoOR12ORFGP (100% identity) | M.Cco2ORF1461P | |
| 1462 | phage virion morphogenesis protein | |||
| 1534 | 173 aa hypothetical protein | |||
| 1535 | M | M.Ccos32805ORF3875P (100% identity) | GATC | M.Cco2ORF1535P |
| 1536 | carbamoyl-phosphate synthase large subunit | |||
| 1593 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 1594 | M | M.CcoSH89ORF1180P (100% identity) | RAATTY | M.Cco2ORF1594P |
| 1595 | translation initiation factor IF-3 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1666 | metal ABC transporter permease | |||
| 1667 | R | Csp6468McrCP (100% identity) | Cco2McrCP | |
| 1668 | R | Cco6461McrBP (100% identity) | Cco2McrBP | |
| 1669 | 95 aa hypothetical protein | |||