Ref: Parisi,A. et al. unpublished

REBASE ref # 32656

Complete sequence: 1,645,026 bp

GenBank #: CP041617

REBASE acronym: Csp25113

Org_num: 50397

 

All begin CVULP_

Type I
ORF Gene Most similar Specificity Name
 
295 aminobenzoyl glutamate transporter family
296 S S1.Hci12219ORF47P (59% identity) S.Csp25113ORF297P
297 M M.Hci12219ORF47P (95% identity) M.Csp25113ORF297P
298 AMP-forming adenylation domain superfamily
 
574 membrane protein
576 M M.HbiAAQJHORF6440P (91% identity) M.Csp25113ORF576P
577 63 aa hypothetical protein
578 Fic domain-containing protein
579 S S.Che51209VI (60% identity) S.Csp25113ORF576P
580 R HbiAAQJHORF6440P (88% identity) Csp25113ORF576P
581 UDP-N-acetylmuramate-alanine ligase
 
1331 tRNA U34 2-thiouridine synthase, MnmA family
1332 S S.Cup6824ORF1355P (69% identity) S.Csp25113ORF1335P
1333 58 aa hypothetical protein
1334 94 aa hypothetical protein
1335 M M.Hbi43879ORF1498P (97% identity) M.Csp25113ORF1335P
1336 R Cup12264ORF1355P (91% identity) Csp25113ORF1335P
1337 16S rRNA m7G527 methyltransferase
 
1606 Tol-Pal system translocation protein TolB
1607 M M.Hca12410ORF239P (75% identity) M.Csp25113ORF1607P
1608 R Hca12410ORF239P (85% identity) Csp25113ORF1607P
1609 S S.Cup11541ORF1651P (60% identity) S.Csp25113ORF1607P
1610 Tol-Pal system subunit TolA
Type II
ORF Gene Most similar Specificity Name
 
12 acetyltransferase
13 M M2.Cup197059ORF1642P (90% identity) M1.Csp25113ORF13P
14 M M2.Che9613ORF6795P (98% identity) M2.Csp25113ORF13P
15 R HbiAAQJHORF5740P (97% identity) Csp25113ORF13P
16 DNA adenine methylase
 
69 YuiF family protein, putative amino acid
70 R Cup12264ORF1745P (94% identity) Csp25113ORF71P
71 M M.Cup12264ORF1745P (91% identity) M.Csp25113ORF71P
72 SPASM domain-containing protein
 
379 type IIP restriction/modification system,
380 M M.HhiYS1ORFYP (81% identity) M.Csp25113ORF380P
381 type II restriction/modification system, DNA
 
380 type IIP restriction/modification system, DNA
381 M M2.Cup197059ORF1148P (88% identity) M.Csp25113ORF381P
382 type IIP restriction/modification system, DNA
383 type IIP restriction/modification system,
384 R HciP01DORFSP (91% identity) Csp25113ORF381P
385 type II DNA methyltransferase
 
381 type II restriction/modification system, DNA
382 M M.Cup197059ORF1150P (95% identity) CTRYAG M.Csp25113ORF382P
383 R Cup197059ORF1150P (96% identity) CTRYAG Csp25113ORF382P
384 type II restriction/modification system,
 
612 chorismate mutase / prephenate dehydratase
613 R Cup11840VIP (96% identity) ACNGT Csp25113ORF614P
614 M M.Cup11541III (95% identity) ACNGT M.Csp25113ORF614P
615 471 aa hypothetical protein
 
820 293 aa hypothetical protein
821 M M.CupORF945P (93% identity) M.Csp25113ORF821P
 
875 undecaprenyl diphosphate synthetase
876 RM Cup11541ORF802P (63% identity) Csp25113ORF876P
877 204 aa hypothetical protein
 
908 exopolyphosphatase, Ppx/GppA family
909 M M.HbiMUII (95% identity) M.Csp25113ORF909P
910 R HbiMUIIP (66% identity) Csp25113ORF909P
911 MCP-domain signal transduction protein
 
924 phosphate ABC transporter, periplasmic
925 R Hca1463ORFKP (93% identity) Csp25113ORF925P
926 type II restriction/modification system, DNA
 
925 type II restriction/modification system,
926 M M.Che51209ORF832P (90% identity) M.Csp25113ORF926P
927 172 aa hypothetical protein
 
1059 thiamine biosynthesis protein
1060 RM CupORF706P (84% identity) Csp25113ORF1060P
1061 N-succinyl-diaminopimelate deacylase
 
1211 FxsA family membrane protein
1212 M M.AflORF17940P (31% identity) M.Csp25113ORF1212P
1213 two-component system response regulator
 
1503 DUF3883 domain-containing protein
1504 M M.HciT36ORF675P (43% identity) M.Csp25113ORF1504P
1505 sugar-phosphate nucleotidyltransferase
 
1657 N-acetyl-gamma-glutamylphosphate reductase,
1658 M M.Che51209III (88% identity) M.Csp25113ORF1658P
1659 papain-like cysteine peptidase (DUF1796
Type III
ORF Gene Most similar Specificity Name
 
1142 lipid A disaccharide synthase
1143 R Cup11541ORF549P (62% identity) Csp25113ORF1146P
1144 188 aa hypothetical protein
1145 ATP-binding protein (AAA domain)
1146 M M.Csp6466ORF8860P (58% identity) M.Csp25113ORF1146P
1147 major antigenic peptide PEB3