Raoultella ornithinolytica NUITM-VR1 |
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Putative Raoultella ornithinolytica NUITM-VR1 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 32924
| Sequence length: | GenBank #: | |
| Chromosome: | 5,648,110 bp | AP025009 |
| plasmid pNUITM-VR1_1: | 378,524 bp | AP025010 |
| plasmid pNUITM-VR1_2: | 261,835 bp | AP025011 |
| plasmid pNUITM-VR1_3: | 139,908 bp | AP025012 |
REBASE acronym: RorVR1
Org_num: 51402
All begin NUITMVR1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8030 | 387 aa hypothetical protein | |||
| 8040 | R | RorBORF22280P (98% identity) | RorVR1ORF8060P | |
| 8050 | S | S.RorBORF22280P (99% identity) | S.RorVR1ORF8060P | |
| 8060 | M | M.RorBORF22280P (98% identity) | M.RorVR1ORF8060P | |
| 8070 | transposase | |||
| 27450 | LysR family transcriptional regulator | |||
| 27460 | S | S.Ror431I (72% identity) | S.RorVR1ORF27460P | |
| 27470 | 296 aa hypothetical protein | |||
| 46060 | GntR family transcriptional regulator | |||
| 46070 | R | Rpl10263IP (100% identity) | CACNNNNNNNATGC | RorVR1ORF46080P |
| 46080 | M | M.Rsp2415ORFAP (99% identity) | CACNNNNNNNATGC | M.RorVR1ORF46080P |
| 46090 | S | S.Ror0ORF4421P (100% identity) | CACNNNNNNNATGC | S.RorVR1ORF46080P |
| 46100 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3840 | cell division protein DamX | |||
| ??? | M | M.RspXY1DamP (100% identity) | GATC | M.RorVR1DamP |
| 3860 | ribulose-phosphate 3-epimerase | |||
| 17400 | phosphohydrolase | |||
| 17410 | M | M.RorNY1DcmP (99% identity) | M.RorVR1DcmP | |
| 17420 | V | V.Rpl13096DcmP (100% identity) | V.RorVR1DcmP | |
| 17430 | drug/metabolite exporter YedA | |||
| 34440 | 52 aa hypothetical protein | |||
| 34450 | M | M2.KmiX21ORFAP (94% identity) | M.RorVR1ORF34450P | |
| 34460 | 80 aa hypothetical protein | |||
| 35910 | 192 aa hypothetical protein | |||
| 35920 | M | M.KpnE0910ORFAP (100% identity) | M.RorVR1ORF35920P | |
| 35930 | 104 aa hypothetical protein | |||
| plasmid pNUITM-VR1_1 | ||||
| 56250 | 109 aa hypothetical protein | |||
| 56260 | M | M.Ror2015ORFCP (100% identity) | M.RorVR1ORF56260P | |
| 56270 | R | Ror2015ORFCP (100% identity) | RorVR1ORF56260P | |
| 56280 | 82 aa hypothetical protein | |||
| 56440 | 81 aa hypothetical protein | |||
| 56450 | M | M.Ror2015ORFDP (100% identity) | M.RorVR1ORF56450P | |
| 56460 | 168 aa hypothetical protein | |||
| plasmid pNUITM-VR1_2 | ||||
| 57430 | 94 aa hypothetical protein | |||
| 57440 | M | M.SmaQC11ORF52800P (100% identity) | M.RorVR1ORF57440P | |
| 57450 | 73 aa hypothetical protein | |||
| plasmid pNUITM-VR1_3 | ||||
| 59990 | 76 aa hypothetical protein | |||
| 60000 | M | M.SmaQC11ORF52800P (100% identity) | M.RorVR1ORF60000P | |
| 60010 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pNUITM-VR1_3 | ||||
| 60270 | helicase SNF2 | |||
| 60280 | M | M.Kqu1502ORF5427P (100% identity) | M.RorVR1ORF60280P | |
| 60290 | R | Kqu1502ORF5427P (100% identity) | RorVR1ORF60280P | |
| 60300 | 128 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 46100 | endoribonuclease SymE | |||
| 46110 | R | Rpl10263McrBP (100% identity) | RorVR1McrBP | |
| 46120 | R | Rpl10263McrCP (100% identity) | RorVR1McrCP | |
| 46130 | 100 aa hypothetical protein | |||