Fusobacterium nucleatum subsp. polymorphum THCT7E2 |
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Putative Fusobacterium nucleatum subsp. polymorphum THCT7E2 RM systems
Ref: Bi,D. et al. unpublished
REBASE ref # 32754
Complete sequence: 2,547,341 bp
GenBank #: CP071096
REBASE acronym: Fnu7E2
Org_num: 50807
All begin JY402_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7705 | winged helix-turn-helix transcriptional | |||
| 7710 | R | FnuSP11ORF6740P (98% identity) | Fnu7E2ORF7730P | |
| 7715 | tyrosine-type recombinase/integrase | |||
| 7720 | S | S3.FpoC48PORF1955P (97% identity) | S2.Fnu7E2ORF7730P | |
| 7725 | S | S3.FnuF319ORF6890P (94% identity) | S1.Fnu7E2ORF7730P | |
| 7730 | M | M.FnuF319ORF6890P (100% identity) | M.Fnu7E2ORF7730P | |
| 7735 | metal ABC transporter permease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3120 | O-methyltransferase | |||
| 3125 | M | M.FnuSB055ORF8365P (96% identity) | M.Fnu7E2ORF3125P | |
| 3130 | response regulator transcription factor | |||
| 3210 | zeta toxin family protein | |||
| 3215 | M | M.FnuF206ORFFP (89% identity) | M.Fnu7E2ORF3215P | |
| 3220 | 141 aa hypothetical protein | |||
| 6715 | 1061 aa hypothetical protein | |||
| 6720 | RM | FnuM1279ORF5380P (89% identity) | Fnu7E2ORF6720P | |
| 6725 | DNA binding domain-containing protein | |||
| 9510 | SWIM zinc finger family protein | |||
| 9515 | M | M.FnuSB6ORF2415P (99% identity) | M.Fnu7E2ORF9515P | |
| 9520 | IS200/IS605 family transposase | |||
| 10750 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 10755 | M | M.Fpo43A3ORF9130P (99% identity) | GCATC | M.Fnu7E2ORF10755P |
| 10760 | ArsB/NhaD family transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7895 | DUF4391 domain-containing protein | |||
| 7900 | M | M.FnuB18ORF4090P (100% identity) | M.Fnu7E2ORF7900P | |
| 7905 | R | FnuB18ORF4090P (99% identity) | Fnu7E2ORF7900P | |
| 7910 | 82 aa hypothetical protein | |||
| 9055 | SUMF1/EgtB/PvdO family nonheme iron enzyme | |||
| 9060 | R | Fnu3714ORF2665P (97% identity) | Fnu7E2ORF9065P | |
| ??? | M | M.Psp189II (38% identity) | M1.Fnu7E2ORF9065P | |
| 9075 | DUF1016 family protein | |||
| 9080 | DUF87 domain-containing protein | |||
| 9085 | SIR2 family protein | |||
| ??? | M | M1.FnuN31A1IV (93% identity) | M2.Fnu7E2ORF9065P | |
| 9100 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | 45 aa hypothetical protein | |||
| 2555 | R | FnuSB5McrBP (100% identity) | Fnu7E2McrBP | |
| 2560 | R | Fpo43A3McrC2P (99% identity) | Fnu7E2McrCP | |
| 2565 | MFS transporter | |||
| 11055 | RidA family protein | |||
| 11060 | R | FnuM3210ORF11235P (99% identity) | Fnu7E2ORF11060P | |
| 11065 | DEAD/DEAH box helicase | |||