Fusobacterium nucleatum subsp. vincentii THCT14A3 |
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Putative Fusobacterium nucleatum subsp. vincentii THCT14A3 RM systems
Ref: Bi,D. et al. unpublished
REBASE ref # 32754
Complete sequence: 2,052,554 bp
GenBank #: CP071093
REBASE acronym: Fnu14A3
Org_num: 50808
All begin JY399_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5225 | RidA family protein | |||
| 5230 | R | Fnu2931ORF6220P (100% identity) | Fnu14A3ORF5235P | |
| 5235 | M | M.Fnu2931ORF6220P (100% identity) | M.Fnu14A3ORF5235P | |
| 5240 | S | S.Fnu2931ORF6220P (100% identity) | S.Fnu14A3ORF5235P | |
| 5245 | SIR2 family protein | |||
| 6215 | cyclically-permuted mutarotase family protein | |||
| 6220 | M | M.FnuCJ004IV (99% identity) | M.Fnu14A3ORF6220P | |
| 6225 | virulence RhuM family protein | |||
| 6230 | S | S1.FnuCJ002II (97% identity) | S1.Fnu14A3ORF6220P | |
| 6235 | S | S2.Fnu2988IIP (100% identity) | S2.Fnu14A3ORF6220P | |
| 6240 | R | FnuM3519IIP (99% identity) | Fnu14A3ORF6220P | |
| 6245 | MATE family efflux transporter | |||
| 9545 | low specificity L-threonine aldolase | |||
| 9550 | R | Fvi100ORF11910P (100% identity) | Fnu14A3ORF9560P | |
| 9555 | S | S.FnuVORFDP (100% identity) | S.Fnu14A3ORF9560P | |
| 9560 | M | M.FnuSB055II (99% identity) | M.Fnu14A3ORF9560P | |
| 9565 | tRNA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1640 | SWIM zinc finger family protein | |||
| 1645 | M | M.Fsp4113ORFKP (100% identity) | M1.Fnu14A3ORF1645P | |
| 1650 | restriction endonuclease | |||
| 1655 | R | FnuCJ002IP (99% identity) | GATC | Fnu14A3ORF1645P |
| 1660 | M | M2.FnuCJ002I (99% identity) | GATC | M2.Fnu14A3ORF1645P |
| 1665 | DNA polymerase III subunit alpha | |||
| 3905 | MarR family transcriptional regulator | |||
| 3910 | S | S.FnuFNVORF470P (100% identity) | GAGNNNNRTAY | S.Fnu14A3ORF3915P |
| 3915 | RM | FnuFNVORF470P (100% identity) | GAGNNNNRTAY | Fnu14A3ORF3915P |
| 3920 | valine--tRNA ligase | |||
| 6675 | aspartate--tRNA ligase | |||
| 6680 | M | M.Fvi100ORF5330P (100% identity) | CAATTG | M.Fnu14A3ORF6680P |
| 6685 | C | C.Fvi100ORF5330P (100% identity) | C.Fnu14A3ORF6680P | |
| 6690 | R | Fvi100ORF5330P (100% identity) | CAATTG | Fnu14A3ORF6680P |
| 6695 | ABC transporter substrate-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1975 | CopG family transcriptional regulator | |||
| 1980 | R | Fvi100McrCP (100% identity) | Fnu14A3McrCP | |
| 1985 | R | Fvi100McrBP (100% identity) | Fnu14A3McrBP | |
| 1990 | 46 aa hypothetical protein | |||
| 5215 | 67 aa hypothetical protein | |||
| 5220 | R | Fnu2931ORF6235P (100% identity) | Fnu14A3ORF5220P | |
| 5225 | RidA family protein | |||